Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LDB1Q86U70 AC090340.1-201ENST00000620778 4980 ntBASIC18.08■□□□□ 0.48
LDB1Q86U70 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LDB1Q86U70 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LDB1Q86U70 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LDB1Q86U70 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB1Q86U70 AC104076.2-201ENST00000448912 469 ntBASIC18.07■□□□□ 0.48
LDB1Q86U70 KRT18P38-201ENST00000449496 1282 ntBASIC18.07■□□□□ 0.48
LDB1Q86U70 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB1Q86U70 AC092597.1-201ENST00000487352 616 ntBASIC18.07■□□□□ 0.48
LDB1Q86U70 AC034232.1-201ENST00000506026 1064 ntBASIC18.07■□□□□ 0.48
LDB1Q86U70 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB1Q86U70 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB1Q86U70 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.07■□□□□ 0.48
LDB1Q86U70 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
LDB1Q86U70 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LDB1Q86U70 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.07■□□□□ 0.48
LDB1Q86U70 AC012317.2-201ENST00000623305 2251 ntBASIC18.07■□□□□ 0.48
LDB1Q86U70 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
LDB1Q86U70 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.07■□□□□ 0.48
LDB1Q86U70 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.07■□□□□ 0.48
LDB1Q86U70 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LDB1Q86U70 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.07■□□□□ 0.48
LDB1Q86U70 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.06■□□□□ 0.48
LDB1Q86U70 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LDB1Q86U70 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.06■□□□□ 0.48
LDB1Q86U70 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.06■□□□□ 0.48
LDB1Q86U70 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LDB1Q86U70 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.06■□□□□ 0.48
LDB1Q86U70 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.06■□□□□ 0.48
LDB1Q86U70 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.06■□□□□ 0.48
LDB1Q86U70 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.06■□□□□ 0.48
LDB1Q86U70 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.06■□□□□ 0.48
LDB1Q86U70 AL031432.5-201ENST00000641059 760 ntBASIC18.06■□□□□ 0.48
LDB1Q86U70 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LDB1Q86U70 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.06■□□□□ 0.48
LDB1Q86U70 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LDB1Q86U70 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.06■□□□□ 0.48
LDB1Q86U70 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 AL391807.1-203ENST00000604392 2365 ntBASIC18.05■□□□□ 0.48
LDB1Q86U70 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.05■□□□□ 0.48
LDB1Q86U70 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.05■□□□□ 0.48
LDB1Q86U70 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LDB1Q86U70 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LDB1Q86U70 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 RCN1P1-201ENST00000400413 996 ntBASIC18.05■□□□□ 0.48
LDB1Q86U70 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.05■□□□□ 0.48
LDB1Q86U70 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.05■□□□□ 0.48
LDB1Q86U70 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.05■□□□□ 0.48
LDB1Q86U70 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.05■□□□□ 0.48
LDB1Q86U70 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.05■□□□□ 0.48
LDB1Q86U70 RN7SL850P-201ENST00000579959 291 ntBASIC18.05■□□□□ 0.48
LDB1Q86U70 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.05■□□□□ 0.48
LDB1Q86U70 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.05■□□□□ 0.48
LDB1Q86U70 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.05■□□□□ 0.48
LDB1Q86U70 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LDB1Q86U70 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms