Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 TERC-201ENST00000602385 541 ntBASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 AC092865.5-201ENST00000545435 363 ntBASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.37■□□□□ 0.05
RAI1Q7Z5J4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 AC104581.1-202ENST00000635932 2618 ntBASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 AC140113.2-201ENST00000604370 208 ntBASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 AC008735.5-201ENST00000623544 497 ntBASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAI1Q7Z5J4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 KRT18P65-201ENST00000439811 1286 ntBASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 AC073592.3-201ENST00000625118 1834 ntBASIC15.35■□□□□ 0.05
RAI1Q7Z5J4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms