Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 KRT18P41-201ENST00000518924 1277 ntBASIC16.98■□□□□ 0.31
RTL4Q6ZR62 AC126763.1-201ENST00000552015 2118 ntBASIC16.98■□□□□ 0.31
RTL4Q6ZR62 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 AL136038.4-201ENST00000603606 1261 ntBASIC16.98■□□□□ 0.31
RTL4Q6ZR62 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.98■□□□□ 0.31
RTL4Q6ZR62 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 AP000997.3-201ENST00000623333 2250 ntBASIC16.97■□□□□ 0.31
RTL4Q6ZR62 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 UPK3BP1-201ENST00000428678 509 ntBASIC16.97■□□□□ 0.31
RTL4Q6ZR62 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 AC116407.4-201ENST00000623319 1061 ntBASIC16.97■□□□□ 0.31
RTL4Q6ZR62 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RTL4Q6ZR62 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 AL645929.1-201ENST00000420084 975 ntBASIC16.96■□□□□ 0.31
RTL4Q6ZR62 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.96■□□□□ 0.31
RTL4Q6ZR62 AC079602.3-201ENST00000623931 403 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms