Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF549Q6P9A3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.98■□□□□ 0.47
ZNF549Q6P9A3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ZNF549Q6P9A3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF549Q6P9A3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.98■□□□□ 0.47
ZNF549Q6P9A3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 AC211429.1-201ENST00000415277 523 ntBASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 LIN28AP1-201ENST00000429574 405 ntBASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 COX11P1-201ENST00000489116 835 ntBASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 AC005363.2-201ENST00000618631 242 ntBASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 AC011558.1-201ENST00000623459 338 ntBASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF549Q6P9A3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 AC005521.1-201ENST00000393351 872 ntBASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 AL137013.1-201ENST00000432946 1228 ntBASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 RASA4DP-201ENST00000460726 1199 ntBASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 AC140113.3-201ENST00000605663 199 ntBASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 AC139887.4-201ENST00000607877 719 ntBASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 LINC00167-201ENST00000530583 1419 ntBASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF549Q6P9A3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 AC012317.2-201ENST00000623305 2251 ntBASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms