Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
KRT39Q6A163 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.55■□□□□ 0.72
KRT39Q6A163 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.55■□□□□ 0.72
KRT39Q6A163 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.55■□□□□ 0.72
KRT39Q6A163 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT39Q6A163 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.55■□□□□ 0.72
KRT39Q6A163 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.55■□□□□ 0.72
KRT39Q6A163 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT39Q6A163 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT39Q6A163 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
KRT39Q6A163 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT39Q6A163 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
KRT39Q6A163 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
KRT39Q6A163 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
KRT39Q6A163 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.54■□□□□ 0.72
KRT39Q6A163 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.54■□□□□ 0.72
KRT39Q6A163 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
KRT39Q6A163 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
KRT39Q6A163 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
KRT39Q6A163 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 IGHGP-201ENST00000390555 1178 ntBASIC19.54■□□□□ 0.72
KRT39Q6A163 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.54■□□□□ 0.72
KRT39Q6A163 AC004263.2-201ENST00000617183 678 ntBASIC19.54■□□□□ 0.72
KRT39Q6A163 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.54■□□□□ 0.72
KRT39Q6A163 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
KRT39Q6A163 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
KRT39Q6A163 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
KRT39Q6A163 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
KRT39Q6A163 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT39Q6A163 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.54■□□□□ 0.72
KRT39Q6A163 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
KRT39Q6A163 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
KRT39Q6A163 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.53■□□□□ 0.72
KRT39Q6A163 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.53■□□□□ 0.72
KRT39Q6A163 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.53■□□□□ 0.72
KRT39Q6A163 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
KRT39Q6A163 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
KRT39Q6A163 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.53■□□□□ 0.72
KRT39Q6A163 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.53■□□□□ 0.72
KRT39Q6A163 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.53■□□□□ 0.72
KRT39Q6A163 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
KRT39Q6A163 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.53■□□□□ 0.72
KRT39Q6A163 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
KRT39Q6A163 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.53■□□□□ 0.72
KRT39Q6A163 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT39Q6A163 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.53■□□□□ 0.72
KRT39Q6A163 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KRT39Q6A163 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.52■□□□□ 0.72
KRT39Q6A163 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
KRT39Q6A163 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.52■□□□□ 0.72
KRT39Q6A163 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT39Q6A163 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.52■□□□□ 0.72
KRT39Q6A163 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
KRT39Q6A163 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
KRT39Q6A163 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT39Q6A163 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT39Q6A163 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT39Q6A163 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT39Q6A163 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.52■□□□□ 0.72
KRT39Q6A163 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.52■□□□□ 0.72
KRT39Q6A163 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.52■□□□□ 0.72
KRT39Q6A163 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.52■□□□□ 0.72
KRT39Q6A163 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.52■□□□□ 0.72
KRT39Q6A163 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.52■□□□□ 0.72
KRT39Q6A163 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
KRT39Q6A163 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.52■□□□□ 0.72
KRT39Q6A163 AL133373.2-201ENST00000623187 2828 ntBASIC19.52■□□□□ 0.72
KRT39Q6A163 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT39Q6A163 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.52■□□□□ 0.72
KRT39Q6A163 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms