Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEP78395 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEP78395 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.27■□□□□ 0.52
PRAMEP78395 AC005363.2-201ENST00000618631 242 ntBASIC18.27■□□□□ 0.52
PRAMEP78395 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEP78395 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PRAMEP78395 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEP78395 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEP78395 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEP78395 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRAMEP78395 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PRAMEP78395 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.27■□□□□ 0.51
PRAMEP78395 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRAMEP78395 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRAMEP78395 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.27■□□□□ 0.51
PRAMEP78395 LINC01126-201ENST00000623515 1646 ntBASIC18.27■□□□□ 0.51
PRAMEP78395 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRAMEP78395 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
PRAMEP78395 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEP78395 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEP78395 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PRAMEP78395 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEP78395 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.26■□□□□ 0.51
PRAMEP78395 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEP78395 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEP78395 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PRAMEP78395 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PRAMEP78395 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.26■□□□□ 0.51
PRAMEP78395 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.26■□□□□ 0.51
PRAMEP78395 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEP78395 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEP78395 AC010203.1-204ENST00000548782 407 ntBASIC18.26■□□□□ 0.51
PRAMEP78395 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PRAMEP78395 AC140113.3-201ENST00000605663 199 ntBASIC18.26■□□□□ 0.51
PRAMEP78395 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEP78395 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEP78395 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEP78395 AL024508.2-201ENST00000607749 1894 ntBASIC18.26■□□□□ 0.51
PRAMEP78395 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEP78395 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEP78395 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEP78395 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PRAMEP78395 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEP78395 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEP78395 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PRAMEP78395 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.25■□□□□ 0.51
PRAMEP78395 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PRAMEP78395 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEP78395 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEP78395 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEP78395 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEP78395 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEP78395 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PRAMEP78395 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PRAMEP78395 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.25■□□□□ 0.51
PRAMEP78395 AC034232.1-201ENST00000506026 1064 ntBASIC18.25■□□□□ 0.51
PRAMEP78395 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEP78395 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PRAMEP78395 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEP78395 AL023973.1-201ENST00000624619 620 ntBASIC18.25■□□□□ 0.51
PRAMEP78395 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 NOC2LP2-201ENST00000407594 1944 ntBASIC18.25■□□□□ 0.51
PRAMEP78395 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEP78395 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEP78395 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEP78395 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PRAMEP78395 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 FLJ13224-201ENST00000313737 1514 ntBASIC18.24■□□□□ 0.51
PRAMEP78395 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PRAMEP78395 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PRAMEP78395 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PRAMEP78395 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEP78395 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.24■□□□□ 0.51
PRAMEP78395 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PRAMEP78395 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.24■□□□□ 0.51
PRAMEP78395 AC113347.1-201ENST00000413321 391 ntBASIC18.24■□□□□ 0.51
PRAMEP78395 AL137013.1-201ENST00000432946 1228 ntBASIC18.24■□□□□ 0.51
PRAMEP78395 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEP78395 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEP78395 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms