Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VSX2P58304 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
VSX2P58304 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.31■□□□□ 0.36
VSX2P58304 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VSX2P58304 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.31■□□□□ 0.36
VSX2P58304 AC124864.1-201ENST00000623408 392 ntBASIC17.31■□□□□ 0.36
VSX2P58304 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.31■□□□□ 0.36
VSX2P58304 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VSX2P58304 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.31■□□□□ 0.36
VSX2P58304 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.31■□□□□ 0.36
VSX2P58304 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.3■□□□□ 0.36
VSX2P58304 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSX2P58304 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VSX2P58304 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.3■□□□□ 0.36
VSX2P58304 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSX2P58304 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VSX2P58304 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.3■□□□□ 0.36
VSX2P58304 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSX2P58304 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.3■□□□□ 0.36
VSX2P58304 TSPY12P-201ENST00000421279 868 ntBASIC17.3■□□□□ 0.36
VSX2P58304 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.3■□□□□ 0.36
VSX2P58304 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.3■□□□□ 0.36
VSX2P58304 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.3■□□□□ 0.36
VSX2P58304 AC092329.2-201ENST00000598402 547 ntBASIC17.3■□□□□ 0.36
VSX2P58304 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.3■□□□□ 0.36
VSX2P58304 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSX2P58304 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
VSX2P58304 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
VSX2P58304 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
VSX2P58304 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VSX2P58304 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.3■□□□□ 0.36
VSX2P58304 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.3■□□□□ 0.36
VSX2P58304 AC090164.3-201ENST00000610780 2143 ntBASIC17.3■□□□□ 0.36
VSX2P58304 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSX2P58304 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSX2P58304 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSX2P58304 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSX2P58304 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
VSX2P58304 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VSX2P58304 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.29■□□□□ 0.36
VSX2P58304 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.29■□□□□ 0.36
VSX2P58304 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
VSX2P58304 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
VSX2P58304 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
VSX2P58304 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.29■□□□□ 0.36
VSX2P58304 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 KRT18P56-201ENST00000507275 550 ntBASIC17.29■□□□□ 0.36
VSX2P58304 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 MIR3180-1-201ENST00000580374 94 ntBASIC17.29■□□□□ 0.36
VSX2P58304 MIR3180-3-201ENST00000584616 94 ntBASIC17.29■□□□□ 0.36
VSX2P58304 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.29■□□□□ 0.36
VSX2P58304 AL592071.1-201ENST00000611956 408 ntBASIC17.29■□□□□ 0.36
VSX2P58304 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VSX2P58304 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
VSX2P58304 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VSX2P58304 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSX2P58304 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
VSX2P58304 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
VSX2P58304 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.28■□□□□ 0.36
VSX2P58304 PHGDH-209ENST00000641074 1780 ntBASIC17.28■□□□□ 0.36
VSX2P58304 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 LTB4R2-202ENST00000528054 3092 ntBASIC17.28■□□□□ 0.36
VSX2P58304 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.28■□□□□ 0.36
VSX2P58304 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.28■□□□□ 0.36
VSX2P58304 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VSX2P58304 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms