Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPAP53621 FZD10-202ENST00000539839 3282 ntBASIC18.68■□□□□ 0.58
COPAP53621 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COPAP53621 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COPAP53621 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.68■□□□□ 0.58
COPAP53621 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COPAP53621 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPAP53621 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.68■□□□□ 0.58
COPAP53621 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.67■□□□□ 0.58
COPAP53621 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 Z83836.1-201ENST00000624605 1642 ntBASIC18.67■□□□□ 0.58
COPAP53621 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.67■□□□□ 0.58
COPAP53621 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.67■□□□□ 0.58
COPAP53621 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.67■□□□□ 0.58
COPAP53621 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.67■□□□□ 0.58
COPAP53621 TPSP2-201ENST00000561760 610 ntBASIC18.67■□□□□ 0.58
COPAP53621 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.67■□□□□ 0.58
COPAP53621 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.67■□□□□ 0.58
COPAP53621 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COPAP53621 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.67■□□□□ 0.58
COPAP53621 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.67■□□□□ 0.58
COPAP53621 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COPAP53621 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.67■□□□□ 0.58
COPAP53621 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COPAP53621 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.67■□□□□ 0.58
COPAP53621 KRT18P1-202ENST00000452408 1331 ntBASIC18.67■□□□□ 0.58
COPAP53621 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COPAP53621 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COPAP53621 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.67■□□□□ 0.58
COPAP53621 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPAP53621 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COPAP53621 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPAP53621 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.66■□□□□ 0.58
COPAP53621 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.66■□□□□ 0.58
COPAP53621 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.66■□□□□ 0.58
COPAP53621 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.66■□□□□ 0.58
COPAP53621 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COPAP53621 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPAP53621 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.66■□□□□ 0.58
COPAP53621 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.66■□□□□ 0.58
COPAP53621 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.66■□□□□ 0.58
COPAP53621 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPAP53621 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPAP53621 DRAXINP1-201ENST00000437611 948 ntBASIC18.66■□□□□ 0.58
COPAP53621 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COPAP53621 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.66■□□□□ 0.58
COPAP53621 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.66■□□□□ 0.58
COPAP53621 AC005332.3-201ENST00000589904 676 ntBASIC18.66■□□□□ 0.58
COPAP53621 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPAP53621 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.66■□□□□ 0.58
COPAP53621 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.66■□□□□ 0.58
COPAP53621 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.66■□□□□ 0.58
COPAP53621 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.66■□□□□ 0.58
COPAP53621 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.66■□□□□ 0.58
COPAP53621 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.66■□□□□ 0.58
COPAP53621 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPAP53621 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPAP53621 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.66■□□□□ 0.58
COPAP53621 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPAP53621 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.65■□□□□ 0.58
COPAP53621 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
COPAP53621 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
COPAP53621 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.65■□□□□ 0.58
COPAP53621 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
COPAP53621 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
COPAP53621 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
COPAP53621 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
COPAP53621 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COPAP53621 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.65■□□□□ 0.58
COPAP53621 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPAP53621 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.65■□□□□ 0.58
COPAP53621 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.65■□□□□ 0.58
COPAP53621 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.65■□□□□ 0.58
COPAP53621 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms