Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.31■□□□□ 0.84
LBX1P52954 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.3■□□□□ 0.84
LBX1P52954 AL024508.2-201ENST00000607749 1894 ntBASIC20.3■□□□□ 0.84
LBX1P52954 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LBX1P52954 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LBX1P52954 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBX1P52954 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.3■□□□□ 0.84
LBX1P52954 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
LBX1P52954 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBX1P52954 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBX1P52954 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBX1P52954 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.3■□□□□ 0.84
LBX1P52954 AC004945.1-201ENST00000416738 983 ntBASIC20.3■□□□□ 0.84
LBX1P52954 AL020989.1-201ENST00000422979 469 ntBASIC20.3■□□□□ 0.84
LBX1P52954 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.3■□□□□ 0.84
LBX1P52954 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.3■□□□□ 0.84
LBX1P52954 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.3■□□□□ 0.84
LBX1P52954 KRT8P48-201ENST00000515599 1220 ntBASIC20.3■□□□□ 0.84
LBX1P52954 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBX1P52954 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.3■□□□□ 0.84
LBX1P52954 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.3■□□□□ 0.84
LBX1P52954 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.3■□□□□ 0.84
LBX1P52954 AL805961.1-202ENST00000641562 540 ntBASIC20.3■□□□□ 0.84
LBX1P52954 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.3■□□□□ 0.84
LBX1P52954 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.3■□□□□ 0.84
LBX1P52954 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LBX1P52954 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LBX1P52954 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LBX1P52954 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBX1P52954 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.29■□□□□ 0.84
LBX1P52954 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.29■□□□□ 0.84
LBX1P52954 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.29■□□□□ 0.84
LBX1P52954 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.29■□□□□ 0.84
LBX1P52954 KRT18P32-201ENST00000424695 1287 ntBASIC20.29■□□□□ 0.84
LBX1P52954 FAM58DP-201ENST00000428076 619 ntBASIC20.29■□□□□ 0.84
LBX1P52954 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.29■□□□□ 0.84
LBX1P52954 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.29■□□□□ 0.84
LBX1P52954 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.29■□□□□ 0.84
LBX1P52954 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.29■□□□□ 0.84
LBX1P52954 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LBX1P52954 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.29■□□□□ 0.84
LBX1P52954 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBX1P52954 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.29■□□□□ 0.84
LBX1P52954 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LBX1P52954 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.28■□□□□ 0.84
LBX1P52954 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LBX1P52954 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.28■□□□□ 0.84
LBX1P52954 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LBX1P52954 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LBX1P52954 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.28■□□□□ 0.84
LBX1P52954 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LBX1P52954 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LBX1P52954 AL592309.1-201ENST00000443127 649 ntBASIC20.28■□□□□ 0.84
LBX1P52954 AC092658.1-201ENST00000505836 891 ntBASIC20.28■□□□□ 0.84
LBX1P52954 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.28■□□□□ 0.84
LBX1P52954 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.28■□□□□ 0.84
LBX1P52954 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LBX1P52954 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.28■□□□□ 0.84
LBX1P52954 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.28■□□□□ 0.84
LBX1P52954 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.28■□□□□ 0.84
LBX1P52954 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LBX1P52954 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LBX1P52954 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.28■□□□□ 0.84
LBX1P52954 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LBX1P52954 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LBX1P52954 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LBX1P52954 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LBX1P52954 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
LBX1P52954 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
LBX1P52954 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LBX1P52954 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
LBX1P52954 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LBX1P52954 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LBX1P52954 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LBX1P52954 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LBX1P52954 MIR1909-201ENST00000411312 80 ntBASIC20.27■□□□□ 0.84
LBX1P52954 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.27■□□□□ 0.84
LBX1P52954 KRT18P41-201ENST00000518924 1277 ntBASIC20.27■□□□□ 0.84
LBX1P52954 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.27■□□□□ 0.84
LBX1P52954 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.27■□□□□ 0.84
LBX1P52954 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms