Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.52■□□□□ 0.24
HMGA2P52926 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.52■□□□□ 0.24
HMGA2P52926 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.52■□□□□ 0.24
HMGA2P52926 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.52■□□□□ 0.24
HMGA2P52926 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
HMGA2P52926 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGA2P52926 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGA2P52926 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGA2P52926 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGA2P52926 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGA2P52926 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGA2P52926 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.52■□□□□ 0.23
HMGA2P52926 AC092338.2-201ENST00000568827 1415 ntBASIC16.52■□□□□ 0.23
HMGA2P52926 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.52■□□□□ 0.23
HMGA2P52926 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGA2P52926 HLA-J-201ENST00000462773 1622 ntBASIC16.52■□□□□ 0.23
HMGA2P52926 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HMGA2P52926 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGA2P52926 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGA2P52926 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 AC084018.2-201ENST00000613093 2607 ntBASIC16.51■□□□□ 0.23
HMGA2P52926 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
HMGA2P52926 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HMGA2P52926 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HMGA2P52926 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 RPS2P55-201ENST00000397318 883 ntBASIC16.51■□□□□ 0.23
HMGA2P52926 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 AC107956.1-201ENST00000494359 873 ntBASIC16.51■□□□□ 0.23
HMGA2P52926 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.51■□□□□ 0.23
HMGA2P52926 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.51■□□□□ 0.23
HMGA2P52926 AP001412.1-201ENST00000608405 714 ntBASIC16.51■□□□□ 0.23
HMGA2P52926 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.51■□□□□ 0.23
HMGA2P52926 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGA2P52926 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.51■□□□□ 0.23
HMGA2P52926 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGA2P52926 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGA2P52926 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 NKILA-202ENST00000614771 2598 ntBASIC16.5■□□□□ 0.23
HMGA2P52926 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGA2P52926 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HMGA2P52926 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGA2P52926 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGA2P52926 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 MIR4651-201ENST00000582622 73 ntBASIC16.5■□□□□ 0.23
HMGA2P52926 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGA2P52926 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 AC010240.3-201ENST00000607688 395 ntBASIC16.5■□□□□ 0.23
HMGA2P52926 LINC01451-201ENST00000623792 534 ntBASIC16.5■□□□□ 0.23
HMGA2P52926 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
HMGA2P52926 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HMGA2P52926 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGA2P52926 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGA2P52926 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
HMGA2P52926 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGA2P52926 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGA2P52926 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
HMGA2P52926 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms