Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CPT1AP50416 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPT1AP50416 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPT1AP50416 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CPT1AP50416 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPT1AP50416 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CPT1AP50416 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.97■□□□□ 0.79
CPT1AP50416 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
CPT1AP50416 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.97■□□□□ 0.79
CPT1AP50416 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 LAGE3P1-201ENST00000425356 484 ntBASIC19.97■□□□□ 0.79
CPT1AP50416 RNA5SP415-201ENST00000517246 115 ntBASIC19.97■□□□□ 0.79
CPT1AP50416 PGAM5P1-201ENST00000518923 814 ntBASIC19.97■□□□□ 0.79
CPT1AP50416 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.97■□□□□ 0.79
CPT1AP50416 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.97■□□□□ 0.79
CPT1AP50416 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CPT1AP50416 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.97■□□□□ 0.79
CPT1AP50416 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPT1AP50416 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.97■□□□□ 0.79
CPT1AP50416 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.97■□□□□ 0.79
CPT1AP50416 ESPNP-201ENST00000270691 2015 ntBASIC19.97■□□□□ 0.79
CPT1AP50416 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.96■□□□□ 0.79
CPT1AP50416 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 AC096633.1-201ENST00000422446 749 ntBASIC19.96■□□□□ 0.79
CPT1AP50416 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.96■□□□□ 0.79
CPT1AP50416 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CPT1AP50416 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CPT1AP50416 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.96■□□□□ 0.79
CPT1AP50416 AL356488.2-201ENST00000602755 427 ntBASIC19.96■□□□□ 0.79
CPT1AP50416 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CPT1AP50416 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
CPT1AP50416 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.96■□□□□ 0.79
CPT1AP50416 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPT1AP50416 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CPT1AP50416 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CPT1AP50416 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.95■□□□□ 0.79
CPT1AP50416 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.95■□□□□ 0.78
CPT1AP50416 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.95■□□□□ 0.78
CPT1AP50416 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.95■□□□□ 0.78
CPT1AP50416 SLC25A24-204ENST00000569674 2357 ntBASIC19.95■□□□□ 0.78
CPT1AP50416 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CPT1AP50416 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.95■□□□□ 0.78
CPT1AP50416 AC079776.2-201ENST00000641154 1609 ntBASIC19.95■□□□□ 0.78
CPT1AP50416 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.95■□□□□ 0.78
CPT1AP50416 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CPT1AP50416 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.95■□□□□ 0.78
CPT1AP50416 AC122714.2-201ENST00000502787 707 ntBASIC19.95■□□□□ 0.78
CPT1AP50416 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.95■□□□□ 0.78
CPT1AP50416 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CPT1AP50416 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CPT1AP50416 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CPT1AP50416 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CPT1AP50416 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPT1AP50416 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CPT1AP50416 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CPT1AP50416 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPT1AP50416 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPT1AP50416 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.94■□□□□ 0.78
CPT1AP50416 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.94■□□□□ 0.78
CPT1AP50416 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms