Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 CDC14B-209ENST00000474602 4960 ntTSL 1 (best)25.34■■□□□ 1.657e-7■■■□□ 15.3
MATR3P43243 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.97e-7■■■□□ 15.3
MATR3P43243 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.87□□□□□ -0.037e-7■■■□□ 15.3
MATR3P43243 CDC14B-204ENST00000412285 5271 ntTSL 1 (best)11.15□□□□□ -0.637e-7■■■□□ 15.3
MATR3P43243 AK4-206ENST00000497030 834 ntTSL 1 (best)28.64■■■□□ 2.185e-6■■■□□ 15.3
MATR3P43243 FAM210A-204ENST00000588475 1389 ntTSL 327.73■■■□□ 2.038e-7■■■□□ 15.3
MATR3P43243 FAM210A-207ENST00000592976 1091 ntTSL 327.29■■□□□ 1.968e-7■■■□□ 15.3
MATR3P43243 FAM210A-203ENST00000585785 1095 ntTSL 1 (best)27.26■■□□□ 1.958e-7■■■□□ 15.3
MATR3P43243 AK4-203ENST00000470888 1043 ntTSL 226■■□□□ 1.755e-6■■■□□ 15.3
MATR3P43243 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.48■■□□□ 1.358e-7■■■□□ 15.3
MATR3P43243 FAM210A-206ENST00000591269 1038 ntTSL 523.17■■□□□ 1.38e-7■■■□□ 15.3
MATR3P43243 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.03■■□□□ 1.125e-6■■■□□ 15.3
MATR3P43243 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.61■□□□□ 0.898e-7■■■□□ 15.3
MATR3P43243 WDR27-208ENST00000479310 1289 ntTSL 520.35■□□□□ 0.858e-7■■■□□ 15.3
MATR3P43243 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.768e-7■■■□□ 15.3
MATR3P43243 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.685e-6■■■□□ 15.3
MATR3P43243 POLR3E-211ENST00000564750 2327 ntTSL 218.97■□□□□ 0.638e-7■■■□□ 15.3
MATR3P43243 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.72■□□□□ 0.598e-7■■■□□ 15.3
MATR3P43243 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.41■□□□□ 0.548e-7■■■□□ 15.3
MATR3P43243 POLR3E-217ENST00000569757 662 ntTSL 418.23■□□□□ 0.518e-7■■■□□ 15.3
MATR3P43243 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.495e-6■■■□□ 15.3
MATR3P43243 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.418e-7■■■□□ 15.3
MATR3P43243 AK4-204ENST00000474968 928 ntTSL 216.26■□□□□ 0.195e-6■■■□□ 15.3
MATR3P43243 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.09■□□□□ 0.014e-7■■■□□ 15.3
MATR3P43243 POLR3E-218ENST00000569787 727 ntTSL 314.9□□□□□ -0.028e-7■■■□□ 15.3
MATR3P43243 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.71□□□□□ -0.054e-7■■■□□ 15.3
MATR3P43243 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.094e-7■■■□□ 15.3
MATR3P43243 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.15e-6■■■□□ 15.3
MATR3P43243 POLR3E-208ENST00000564061 4800 ntTSL 1 (best)14.4□□□□□ -0.18e-7■■■□□ 15.3
MATR3P43243 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC14.22□□□□□ -0.138e-7■■■□□ 15.3
MATR3P43243 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.148e-7■■■□□ 15.3
MATR3P43243 MBNL3-207ENST00000421707 946 ntTSL 513.84□□□□□ -0.198e-7■■■□□ 15.3
MATR3P43243 WDR27-211ENST00000546525 3511 ntTSL 1 (best)13.48□□□□□ -0.258e-7■■■□□ 15.3
MATR3P43243 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.44e-7■■■□□ 15.3
MATR3P43243 CFAP44-201ENST00000295868 3377 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.568e-7■■■□□ 15.3
MATR3P43243 CFAP44-210ENST00000488854 2410 ntTSL 57.73□□□□□ -1.178e-7■■■□□ 15.3
MATR3P43243 MBNL3-208ENST00000436215 891 ntTSL 35.96□□□□□ -1.468e-7■■■□□ 15.3
MATR3P43243 NDUFAF2-204ENST00000512623 696 ntTSL 34.92□□□□□ -1.628e-7■■■□□ 15.3
MATR3P43243 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.718e-7■■■□□ 15.3
MATR3P43243 CFAP44-207ENST00000475568 554 ntTSL 43.27□□□□□ -1.898e-7■■■□□ 15.3
MATR3P43243 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.33e-7■■■□□ 15.3
MATR3P43243 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.713e-7■■■□□ 15.3
MATR3P43243 STRN3-206ENST00000555152 567 ntTSL 43.74□□□□□ -1.812e-6■■■□□ 15.3
MATR3P43243 SEC63-203ENST00000446496 583 ntTSL 420.5■□□□□ 0.873e-8■■■□□ 15.3
MATR3P43243 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.3■□□□□ 0.845e-10■■■□□ 15.3
MATR3P43243 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.3■□□□□ 0.525e-10■■■□□ 15.3
MATR3P43243 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.485e-10■■■□□ 15.3
MATR3P43243 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.413e-8■■■□□ 15.3
MATR3P43243 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.37■□□□□ 0.055e-10■■■□□ 15.3
MATR3P43243 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.64□□□□□ -0.075e-10■■■□□ 15.3
MATR3P43243 FAM104A-207ENST00000583178 563 ntTSL 414.19□□□□□ -0.145e-10■■■□□ 15.3
MATR3P43243 FAM104A-203ENST00000579872 422 ntTSL 210.74□□□□□ -0.695e-10■■■□□ 15.3
MATR3P43243 SEC63-209ENST00000484803 724 ntTSL 25.73□□□□□ -1.493e-8■■■□□ 15.3
MATR3P43243 SEC63-202ENST00000429168 647 ntTSL 55.6□□□□□ -1.513e-8■■■□□ 15.3
MATR3P43243 ELL2-207ENST00000515020 340 ntTSL 227.03■■□□□ 1.922e-9■■■□□ 15.3
MATR3P43243 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.582e-6■■■□□ 15.3
MATR3P43243 ROCK2-204ENST00000431087 729 ntTSL 35.58□□□□□ -1.527e-7■■■□□ 15.3
MATR3P43243 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.41■□□□□ 0.541e-6■■■□□ 15.3
MATR3P43243 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.051e-6■■■□□ 15.3
MATR3P43243 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC14.55□□□□□ -0.081e-6■■■□□ 15.3
MATR3P43243 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC13.17□□□□□ -0.31e-6■■■□□ 15.3
MATR3P43243 TMEM50B-204ENST00000442441 982 ntTSL 1 (best)22.21■■□□□ 1.152e-7■■■□□ 15.3
MATR3P43243 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.582e-7■■■□□ 15.3
MATR3P43243 TMEM50B-201ENST00000420455 3062 ntTSL 1 (best)14.42□□□□□ -0.12e-7■■■□□ 15.3
MATR3P43243 TMEM50B-203ENST00000441128 634 ntTSL 54.13□□□□□ -1.752e-7■■■□□ 15.3
MATR3P43243 FNBP1L-202ENST00000271234 4212 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.513e-6■■■□□ 15.3
MATR3P43243 FNBP1L-201ENST00000260506 5341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.593e-6■■■□□ 15.3
MATR3P43243 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.743e-6■■■□□ 15.3
MATR3P43243 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.873e-6■■■□□ 15.3
MATR3P43243 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC9.88□□□□□ -0.837e-7■■■□□ 15.3
MATR3P43243 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.029e-7■■■□□ 15.3
MATR3P43243 ABHD5-201ENST00000013894 833 ntTSL 320.29■□□□□ 0.849e-7■■■□□ 15.3
MATR3P43243 SEPT9-241ENST00000591934 553 ntTSL 418.77■□□□□ 0.62e-6■■■□□ 15.3
MATR3P43243 SEPT9-231ENST00000590595 569 ntTSL 317.46■□□□□ 0.392e-6■■■□□ 15.3
MATR3P43243 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.066e-7■■■□□ 15.3
MATR3P43243 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.26e-7■■■□□ 15.3
MATR3P43243 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.246e-7■■■□□ 15.3
MATR3P43243 IST1-223ENST00000545518 710 ntTSL 213.18□□□□□ -0.36e-7■■■□□ 15.3
MATR3P43243 IST1-205ENST00000439924 1841 ntTSL 513.06□□□□□ -0.326e-7■■■□□ 15.3
MATR3P43243 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC12.46□□□□□ -0.416e-7■■■□□ 15.3
MATR3P43243 IST1-215ENST00000538850 1125 ntTSL 3 BASIC12.29□□□□□ -0.446e-7■■■□□ 15.3
MATR3P43243 IST1-206ENST00000456820 2031 ntTSL 512.01□□□□□ -0.496e-7■■■□□ 15.3
MATR3P43243 IST1-213ENST00000538565 1245 ntTSL 211.95□□□□□ -0.56e-7■■■□□ 15.3
MATR3P43243 IST1-211ENST00000537613 894 ntTSL 211.75□□□□□ -0.536e-7■■■□□ 15.3
MATR3P43243 IST1-202ENST00000378798 2255 ntTSL 1 (best) BASIC11.58□□□□□ -0.566e-7■■■□□ 15.3
MATR3P43243 IST1-207ENST00000534994 674 ntTSL 511.28□□□□□ -0.66e-7■■■□□ 15.3
MATR3P43243 IST1-216ENST00000539186 542 ntTSL 410.82□□□□□ -0.686e-7■■■□□ 15.3
MATR3P43243 IST1-226ENST00000606369 3583 ntTSL 2 BASIC10.12□□□□□ -0.796e-7■■■□□ 15.3
MATR3P43243 IST1-204ENST00000424485 521 ntTSL 49.91□□□□□ -0.826e-7■■■□□ 15.3
MATR3P43243 IST1-224ENST00000566536 612 ntTSL 29.57□□□□□ -0.886e-7■■■□□ 15.3
MATR3P43243 IST1-208ENST00000535424 4082 ntTSL 5 BASIC9.4□□□□□ -0.96e-7■■■□□ 15.3
MATR3P43243 IST1-220ENST00000541918 908 ntTSL 59.23□□□□□ -0.936e-7■■■□□ 15.3
MATR3P43243 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.48□□□□□ -2.336e-7■■■□□ 15.3
MATR3P43243 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.094e-6■■■□□ 15.2
MATR3P43243 PHYHIPL-204ENST00000486074 1971 ntTSL 29.95□□□□□ -0.825e-7■■■□□ 15.2
MATR3P43243 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.95e-7■■■□□ 15.2
MATR3P43243 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.14□□□□□ -1.275e-7■■■□□ 15.2
MATR3P43243 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.91e-6■■■□□ 15.2
MATR3P43243 LRCH1-204ENST00000443945 2070 ntTSL 1 (best)19.85■□□□□ 0.771e-6■■■□□ 15.2
MATR3P43243 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.331e-6■■■□□ 15.2
Retrieved 100 of 16,209 protein–RNA pairs in 81.4 ms