RNA–Protein interactions for RNA: ENST00000555152.1

STRN3-206, Transcript of striatin 3, humanhuman

TSL 4

Gene STRN3, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-206ENST00000555152 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
STRN3-206ENST00000555152 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
STRN3-206ENST00000555152 PHF23Q9BUL5 403 aaPredicted RBP24.15■■□□□ 1.46
STRN3-206ENST00000555152 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
STRN3-206ENST00000555152 FOXD1Q16676 465 aa22.45■■□□□ 1.18
STRN3-206ENST00000555152 PLPPR3Q6T4P5 718 aa21.95■■□□□ 1.1
STRN3-206ENST00000555152 PPP6R1Q9UPN7 881 aa21.44■■□□□ 1.02
STRN3-206ENST00000555152 ADRA2BP18089 450 aa21.34■■□□□ 1.01
STRN3-206ENST00000555152 PIAS4Q8N2W9 510 aaPredicted RBP20.99■□□□□ 0.95
STRN3-206ENST00000555152 MSH5O43196 834 aa20.65■□□□□ 0.9
STRN3-206ENST00000555152 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
STRN3-206ENST00000555152 MAPK8IP2Q13387 824 aaPredicted RBP19.51■□□□□ 0.71
STRN3-206ENST00000555152 PPP4R3CPQ6ZMV5 832 aa19.37■□□□□ 0.69
STRN3-206ENST00000555152 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
STRN3-206ENST00000555152 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
STRN3-206ENST00000555152 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
STRN3-206ENST00000555152 HOXD11P31277 338 aaPredicted RBP18.64■□□□□ 0.57
STRN3-206ENST00000555152 KCNA4P22459 653 aa18.61■□□□□ 0.57
STRN3-206ENST00000555152 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
STRN3-206ENST00000555152 RNF216Q9NWF9 866 aaPredicted RBP18.57■□□□□ 0.56
STRN3-206ENST00000555152 NPM3O75607 178 aaKnown RBP18.53■□□□□ 0.56
STRN3-206ENST00000555152 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
STRN3-206ENST00000555152 DNAJC5BQ9UF47 199 aa17.99■□□□□ 0.47
STRN3-206ENST00000555152 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
STRN3-206ENST00000555152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.68■□□□□ 0.42
STRN3-206ENST00000555152 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
STRN3-206ENST00000555152 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
STRN3-206ENST00000555152 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
STRN3-206ENST00000555152 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
STRN3-206ENST00000555152 C1QBPQ07021 282 aaKnown RBP17.46■□□□□ 0.39
STRN3-206ENST00000555152 ZBTB22O15209 634 aa17.21■□□□□ 0.35
STRN3-206ENST00000555152 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
STRN3-206ENST00000555152 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
STRN3-206ENST00000555152 MYCNP04198 464 aaPredicted RBP17.01■□□□□ 0.31
STRN3-206ENST00000555152 CAPN15O75808 1086 aa16.93■□□□□ 0.3
STRN3-206ENST00000555152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
STRN3-206ENST00000555152 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
STRN3-206ENST00000555152 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
STRN3-206ENST00000555152 DSG3P32926 999 aa16.82■□□□□ 0.28
STRN3-206ENST00000555152 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
STRN3-206ENST00000555152 ATF5Q9Y2D1 282 aaPredicted RBP16.8■□□□□ 0.28
STRN3-206ENST00000555152 CSRNP3Q8WYN3 585 aa16.76■□□□□ 0.27
STRN3-206ENST00000555152 APLP2Q06481 763 aa16.73■□□□□ 0.27
STRN3-206ENST00000555152 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
STRN3-206ENST00000555152 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
STRN3-206ENST00000555152 ABCB7O75027 752 aa16.66■□□□□ 0.26
STRN3-206ENST00000555152 ATXN8OSP0DMR3 200 aa16.5■□□□□ 0.23
STRN3-206ENST00000555152 POLA2Q14181 598 aa16.48■□□□□ 0.23
STRN3-206ENST00000555152 MKRN4PQ13434 485 aaPredicted RBP16.03■□□□□ 0.16
STRN3-206ENST00000555152 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
STRN3-206ENST00000555152 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
STRN3-206ENST00000555152 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
STRN3-206ENST00000555152 FBLN2P98095 1184 aa15.84■□□□□ 0.13
STRN3-206ENST00000555152 AKT1S1Q96B36 256 aa15.67■□□□□ 0.1
STRN3-206ENST00000555152 SPDYE2BA6NHP3 402 aa15.64■□□□□ 0.09
STRN3-206ENST00000555152 SPDYE6P0CI01 402 aa15.64■□□□□ 0.09
STRN3-206ENST00000555152 SPDYE2Q495Y8 402 aa15.64■□□□□ 0.09
STRN3-206ENST00000555152 REM2Q8IYK8 340 aaPredicted RBP15.6■□□□□ 0.09
STRN3-206ENST00000555152 SSUH2Q9Y2M2 353 aa15.57■□□□□ 0.08
STRN3-206ENST00000555152 ZNF692Q9BU19 519 aaPredicted RBP15.54■□□□□ 0.08
STRN3-206ENST00000555152 CHRDL2Q6WN34 429 aa15.45■□□□□ 0.06
STRN3-206ENST00000555152 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
STRN3-206ENST00000555152 POTEHQ6S545 545 aa15.37■□□□□ 0.05
STRN3-206ENST00000555152 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
STRN3-206ENST00000555152 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
STRN3-206ENST00000555152 SPDYE1Q8NFV5 336 aaPredicted RBP15.24■□□□□ 0.03
STRN3-206ENST00000555152 PIP4P2Q8N4L2 257 aa15.23■□□□□ 0.03
STRN3-206ENST00000555152 CLEC11AQ9Y240 323 aa15.22■□□□□ 0.03
STRN3-206ENST00000555152 FXR2P51116 673 aaKnown RBP eCLIP15.21■□□□□ 0.03
STRN3-206ENST00000555152 PROM2Q8N271 834 aa15.14■□□□□ 0.01
STRN3-206ENST00000555152 FKBP8Q14318 412 aa15.08■□□□□ 0
STRN3-206ENST00000555152 PRR29P0C7W0 189 aa15.02■□□□□ -0
STRN3-206ENST00000555152 CHADLQ6NUI6 762 aa15□□□□□ -0.01
STRN3-206ENST00000555152 PRKAR2AP13861 404 aaKnown RBP14.99□□□□□ -0.01
STRN3-206ENST00000555152 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
STRN3-206ENST00000555152 CREBZFQ9NS37 354 aa14.88□□□□□ -0.03
STRN3-206ENST00000555152 EVX2Q03828 476 aa14.82□□□□□ -0.04
STRN3-206ENST00000555152 HAX1O00165 279 aa14.76□□□□□ -0.05
STRN3-206ENST00000555152 FARP1Q9Y4F1 1045 aaPredicted RBP14.76□□□□□ -0.05
STRN3-206ENST00000555152 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
STRN3-206ENST00000555152 C19orf67A6NJJ6 358 aa14.7□□□□□ -0.06
STRN3-206ENST00000555152 SP7Q8TDD2 431 aaPredicted RBP14.6□□□□□ -0.07
STRN3-206ENST00000555152 MIER1Q8N108 512 aa14.57□□□□□ -0.08
STRN3-206ENST00000555152 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
STRN3-206ENST00000555152 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
STRN3-206ENST00000555152 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
STRN3-206ENST00000555152 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
STRN3-206ENST00000555152 VASPP50552 380 aaPredicted RBP14.43□□□□□ -0.1
STRN3-206ENST00000555152 ZRANB1Q9UGI0 708 aa14.4□□□□□ -0.1
STRN3-206ENST00000555152 GABBR2O75899 941 aa14.37□□□□□ -0.11
STRN3-206ENST00000555152 RASEFQ8IZ41 740 aa14.37□□□□□ -0.11
STRN3-206ENST00000555152 PLEKHG5O94827 1062 aa14.34□□□□□ -0.11
STRN3-206ENST00000555152 NUBP1P53384 320 aa14.34□□□□□ -0.11
STRN3-206ENST00000555152 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
STRN3-206ENST00000555152 PHF12Q96QT6 1004 aa14.32□□□□□ -0.12
STRN3-206ENST00000555152 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
STRN3-206ENST00000555152 IFNLR1Q8IU57 520 aaPredicted RBP14.3□□□□□ -0.12
STRN3-206ENST00000555152 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
STRN3-206ENST00000555152 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
STRN3-206ENST00000555152 PAK3O75914 559 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms