Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GRIA1P42261 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GRIA1P42261 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GRIA1P42261 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GRIA1P42261 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
GRIA1P42261 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.36■□□□□ 0.53
GRIA1P42261 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
GRIA1P42261 AL023973.1-201ENST00000624619 620 ntBASIC18.36■□□□□ 0.53
GRIA1P42261 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRIA1P42261 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GRIA1P42261 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIA1P42261 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIA1P42261 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.35■□□□□ 0.53
GRIA1P42261 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIA1P42261 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
GRIA1P42261 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GRIA1P42261 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIA1P42261 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GRIA1P42261 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.35■□□□□ 0.53
GRIA1P42261 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.35■□□□□ 0.53
GRIA1P42261 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GRIA1P42261 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GRIA1P42261 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIA1P42261 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIA1P42261 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.35■□□□□ 0.53
GRIA1P42261 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.35■□□□□ 0.53
GRIA1P42261 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.35■□□□□ 0.53
GRIA1P42261 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.35■□□□□ 0.53
GRIA1P42261 AC092865.7-201ENST00000641832 219 ntBASIC18.35■□□□□ 0.53
GRIA1P42261 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GRIA1P42261 PP12613-201ENST00000424958 2230 ntBASIC18.35■□□□□ 0.53
GRIA1P42261 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
GRIA1P42261 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIA1P42261 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIA1P42261 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.35■□□□□ 0.53
GRIA1P42261 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GRIA1P42261 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
GRIA1P42261 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GRIA1P42261 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GRIA1P42261 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.34■□□□□ 0.53
GRIA1P42261 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.34■□□□□ 0.53
GRIA1P42261 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.34■□□□□ 0.53
GRIA1P42261 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.34■□□□□ 0.53
GRIA1P42261 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
GRIA1P42261 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.34■□□□□ 0.53
GRIA1P42261 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GRIA1P42261 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GRIA1P42261 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.34■□□□□ 0.53
GRIA1P42261 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIA1P42261 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GRIA1P42261 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.34■□□□□ 0.53
GRIA1P42261 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.33■□□□□ 0.53
GRIA1P42261 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GRIA1P42261 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GRIA1P42261 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.33■□□□□ 0.53
GRIA1P42261 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
GRIA1P42261 LINC00167-201ENST00000530583 1419 ntBASIC18.33■□□□□ 0.53
GRIA1P42261 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
GRIA1P42261 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GRIA1P42261 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
GRIA1P42261 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.33■□□□□ 0.53
GRIA1P42261 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.33■□□□□ 0.53
GRIA1P42261 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 PVRIG2P-201ENST00000435460 978 ntBASIC18.33■□□□□ 0.52
GRIA1P42261 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.33■□□□□ 0.52
GRIA1P42261 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.33■□□□□ 0.52
GRIA1P42261 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.33■□□□□ 0.52
GRIA1P42261 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GRIA1P42261 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.33■□□□□ 0.52
GRIA1P42261 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
GRIA1P42261 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.33■□□□□ 0.52
GRIA1P42261 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GRIA1P42261 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GRIA1P42261 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms