Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC8P31273 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXC8P31273 UNC93B6-202ENST00000528242 690 ntBASIC19.65■□□□□ 0.74
HOXC8P31273 AC092865.5-201ENST00000545435 363 ntBASIC19.65■□□□□ 0.74
HOXC8P31273 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXC8P31273 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC8P31273 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXC8P31273 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC8P31273 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC8P31273 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
HOXC8P31273 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC8P31273 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC8P31273 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HOXC8P31273 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HOXC8P31273 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXC8P31273 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXC8P31273 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXC8P31273 AC073621.1-201ENST00000392730 636 ntBASIC19.64■□□□□ 0.73
HOXC8P31273 MIR940-201ENST00000401276 94 ntBASIC19.64■□□□□ 0.73
HOXC8P31273 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.64■□□□□ 0.73
HOXC8P31273 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXC8P31273 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXC8P31273 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXC8P31273 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXC8P31273 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXC8P31273 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXC8P31273 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC8P31273 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXC8P31273 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC8P31273 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
HOXC8P31273 AL356488.2-201ENST00000602755 427 ntBASIC19.64■□□□□ 0.73
HOXC8P31273 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC8P31273 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXC8P31273 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HOXC8P31273 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC8P31273 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC8P31273 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
HOXC8P31273 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HOXC8P31273 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC8P31273 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HOXC8P31273 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC8P31273 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC8P31273 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC8P31273 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HOXC8P31273 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC8P31273 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC8P31273 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC8P31273 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXC8P31273 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC8P31273 AL353593.2-201ENST00000602529 1483 ntBASIC19.63■□□□□ 0.73
HOXC8P31273 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC8P31273 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC8P31273 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
HOXC8P31273 MED15P5-201ENST00000423150 992 ntBASIC19.63■□□□□ 0.73
HOXC8P31273 AC103564.2-201ENST00000432853 1299 ntBASIC19.63■□□□□ 0.73
HOXC8P31273 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC8P31273 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXC8P31273 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HOXC8P31273 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.63■□□□□ 0.73
HOXC8P31273 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC8P31273 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC8P31273 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC8P31273 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXC8P31273 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC8P31273 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HOXC8P31273 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HOXC8P31273 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC8P31273 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC8P31273 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HOXC8P31273 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC8P31273 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC8P31273 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC8P31273 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC8P31273 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC8P31273 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.62■□□□□ 0.73
HOXC8P31273 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC8P31273 MIR1233-2-201ENST00000408138 82 ntBASIC19.62■□□□□ 0.73
HOXC8P31273 MIR1233-1-201ENST00000408722 82 ntBASIC19.62■□□□□ 0.73
HOXC8P31273 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC8P31273 AC009947.1-201ENST00000444350 727 ntBASIC19.62■□□□□ 0.73
HOXC8P31273 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXC8P31273 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.62■□□□□ 0.73
HOXC8P31273 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXC8P31273 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC8P31273 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC8P31273 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXC8P31273 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC8P31273 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC8P31273 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
HOXC8P31273 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 AC022898.2-201ENST00000616822 1312 ntBASIC19.61■□□□□ 0.73
HOXC8P31273 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HOXC8P31273 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms