Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.3■□□□□ 0.84
CTGFP29279 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.3■□□□□ 0.84
CTGFP29279 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.3■□□□□ 0.84
CTGFP29279 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.3■□□□□ 0.84
CTGFP29279 AC122714.2-201ENST00000502787 707 ntBASIC20.3■□□□□ 0.84
CTGFP29279 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.3■□□□□ 0.84
CTGFP29279 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 IGHV3-65-201ENST00000523210 341 ntBASIC20.3■□□□□ 0.84
CTGFP29279 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.3■□□□□ 0.84
CTGFP29279 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.3■□□□□ 0.84
CTGFP29279 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CTGFP29279 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.3■□□□□ 0.84
CTGFP29279 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.3■□□□□ 0.84
CTGFP29279 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.3■□□□□ 0.84
CTGFP29279 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.3■□□□□ 0.84
CTGFP29279 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CTGFP29279 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.3■□□□□ 0.84
CTGFP29279 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CTGFP29279 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTGFP29279 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTGFP29279 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTGFP29279 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTGFP29279 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
CTGFP29279 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CTGFP29279 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTGFP29279 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.29■□□□□ 0.84
CTGFP29279 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CTGFP29279 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.29■□□□□ 0.84
CTGFP29279 AC073592.5-201ENST00000624854 528 ntBASIC20.29■□□□□ 0.84
CTGFP29279 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTGFP29279 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTGFP29279 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CTGFP29279 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.29■□□□□ 0.84
CTGFP29279 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTGFP29279 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTGFP29279 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTGFP29279 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.28■□□□□ 0.84
CTGFP29279 AC148477.5-201ENST00000625164 1645 ntBASIC20.28■□□□□ 0.84
CTGFP29279 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTGFP29279 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTGFP29279 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTGFP29279 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTGFP29279 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.28■□□□□ 0.84
CTGFP29279 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.28■□□□□ 0.84
CTGFP29279 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CTGFP29279 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CTGFP29279 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.28■□□□□ 0.84
CTGFP29279 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTGFP29279 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTGFP29279 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.28■□□□□ 0.84
CTGFP29279 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.28■□□□□ 0.84
CTGFP29279 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTGFP29279 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.27■□□□□ 0.84
CTGFP29279 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.27■□□□□ 0.84
CTGFP29279 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTGFP29279 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.27■□□□□ 0.84
CTGFP29279 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CTGFP29279 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTGFP29279 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.27■□□□□ 0.84
CTGFP29279 KRT8P47-201ENST00000604727 1398 ntBASIC20.27■□□□□ 0.84
CTGFP29279 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTGFP29279 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.27■□□□□ 0.84
CTGFP29279 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CTGFP29279 TSEN15P1-201ENST00000423257 515 ntBASIC20.27■□□□□ 0.84
CTGFP29279 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTGFP29279 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.27■□□□□ 0.84
CTGFP29279 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTGFP29279 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.27■□□□□ 0.84
CTGFP29279 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.27■□□□□ 0.84
CTGFP29279 AC008667.4-201ENST00000607370 168 ntBASIC20.27■□□□□ 0.84
CTGFP29279 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CTGFP29279 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.27■□□□□ 0.83
CTGFP29279 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.27■□□□□ 0.83
CTGFP29279 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTGFP29279 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CTGFP29279 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CTGFP29279 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CTGFP29279 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTGFP29279 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CTGFP29279 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTGFP29279 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTGFP29279 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms