Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CHMLP26374 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.83■■□□□ 1.08
CHMLP26374 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.83■■□□□ 1.08
CHMLP26374 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CHMLP26374 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHMLP26374 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMLP26374 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CHMLP26374 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMLP26374 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.82■■□□□ 1.08
CHMLP26374 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
CHMLP26374 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CHMLP26374 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CHMLP26374 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMLP26374 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMLP26374 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMLP26374 AK4P3-201ENST00000418260 669 ntBASIC21.82■■□□□ 1.08
CHMLP26374 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.82■■□□□ 1.08
CHMLP26374 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.82■■□□□ 1.08
CHMLP26374 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHMLP26374 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMLP26374 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHMLP26374 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMLP26374 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMLP26374 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMLP26374 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMLP26374 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMLP26374 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMLP26374 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMLP26374 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CHMLP26374 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMLP26374 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CHMLP26374 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMLP26374 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMLP26374 RCN1P1-201ENST00000400413 996 ntBASIC21.81■■□□□ 1.08
CHMLP26374 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMLP26374 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CHMLP26374 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.81■■□□□ 1.08
CHMLP26374 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.81■■□□□ 1.08
CHMLP26374 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMLP26374 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMLP26374 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CHMLP26374 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMLP26374 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMLP26374 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMLP26374 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CHMLP26374 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMLP26374 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.81■■□□□ 1.08
CHMLP26374 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHMLP26374 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHMLP26374 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.81■■□□□ 1.08
CHMLP26374 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMLP26374 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMLP26374 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.8■■□□□ 1.08
CHMLP26374 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMLP26374 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.8■■□□□ 1.08
CHMLP26374 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CHMLP26374 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.8■■□□□ 1.08
CHMLP26374 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CHMLP26374 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.8■■□□□ 1.08
CHMLP26374 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMLP26374 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CHMLP26374 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CHMLP26374 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
CHMLP26374 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMLP26374 HBZP1-201ENST00000354915 429 ntBASIC21.8■■□□□ 1.08
CHMLP26374 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMLP26374 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMLP26374 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CHMLP26374 HOMER2P1-201ENST00000455653 964 ntBASIC21.8■■□□□ 1.08
CHMLP26374 AL359075.1-203ENST00000462729 1002 ntBASIC21.8■■□□□ 1.08
CHMLP26374 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.8■■□□□ 1.08
CHMLP26374 AC004263.2-201ENST00000617183 678 ntBASIC21.8■■□□□ 1.08
CHMLP26374 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.8■■□□□ 1.08
CHMLP26374 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHMLP26374 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHMLP26374 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMLP26374 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHMLP26374 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CHMLP26374 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
CHMLP26374 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMLP26374 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMLP26374 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMLP26374 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.79■■□□□ 1.08
CHMLP26374 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.79■■□□□ 1.08
CHMLP26374 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMLP26374 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CHMLP26374 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMLP26374 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
CHMLP26374 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMLP26374 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMLP26374 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMLP26374 MIR662-201ENST00000384847 95 ntBASIC21.79■■□□□ 1.08
CHMLP26374 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMLP26374 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.79■■□□□ 1.08
CHMLP26374 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.79■■□□□ 1.08
CHMLP26374 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.79■■□□□ 1.08
CHMLP26374 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.79■■□□□ 1.08
CHMLP26374 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHMLP26374 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHMLP26374 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms