Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AC073592.5-201ENST00000624854 528 ntBASIC15.12■□□□□ 0.01
APCP25054 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
APCP25054 AC012676.1-201ENST00000574705 1949 ntBASIC15.11■□□□□ 0.01
APCP25054 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.11■□□□□ 0.01
APCP25054 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
APCP25054 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
APCP25054 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
APCP25054 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
APCP25054 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
APCP25054 AL606495.2-201ENST00000605867 535 ntBASIC15.11■□□□□ 0.01
APCP25054 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.11■□□□□ 0.01
APCP25054 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
APCP25054 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.11■□□□□ 0.01
APCP25054 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
APCP25054 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APCP25054 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.11■□□□□ 0.01
APCP25054 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APCP25054 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.11■□□□□ 0.01
APCP25054 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
APCP25054 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
APCP25054 AL627223.1-201ENST00000416693 442 ntBASIC15.11■□□□□ 0.01
APCP25054 AC022494.1-201ENST00000466044 728 ntBASIC15.11■□□□□ 0.01
APCP25054 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.11■□□□□ 0.01
APCP25054 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.11■□□□□ 0.01
APCP25054 AC004790.2-201ENST00000623588 572 ntBASIC15.11■□□□□ 0.01
APCP25054 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APCP25054 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.1■□□□□ 0.01
APCP25054 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
APCP25054 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APCP25054 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
APCP25054 GABARAPL3-202ENST00000624044 1851 ntBASIC15.1■□□□□ 0.01
APCP25054 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APCP25054 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.1■□□□□ 0.01
APCP25054 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APCP25054 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APCP25054 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
APCP25054 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.1■□□□□ 0.01
APCP25054 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
APCP25054 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
APCP25054 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.1■□□□□ 0.01
APCP25054 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.1■□□□□ 0.01
APCP25054 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.1■□□□□ 0.01
APCP25054 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
APCP25054 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.1■□□□□ 0.01
APCP25054 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.1■□□□□ 0.01
APCP25054 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.1■□□□□ 0.01
APCP25054 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
APCP25054 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
APCP25054 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
APCP25054 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APCP25054 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
APCP25054 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
APCP25054 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.1■□□□□ 0.01
APCP25054 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.1■□□□□ 0.01
APCP25054 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
APCP25054 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.1■□□□□ 0.01
APCP25054 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
APCP25054 BCAR1-209ENST00000546196 1340 ntBASIC15.1■□□□□ 0.01
APCP25054 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.1■□□□□ 0.01
APCP25054 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
APCP25054 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.1■□□□□ 0.01
APCP25054 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 LINC01006-201ENST00000333319 2292 ntBASIC15.09■□□□□ 0.01
APCP25054 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.09■□□□□ 0.01
APCP25054 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
APCP25054 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
APCP25054 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.09■□□□□ 0.01
APCP25054 ARSEP1-201ENST00000420443 635 ntBASIC15.09■□□□□ 0.01
APCP25054 NME2P1-201ENST00000426182 414 ntBASIC15.09■□□□□ 0.01
APCP25054 AC245100.3-201ENST00000441281 285 ntBASIC15.09■□□□□ 0.01
APCP25054 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.09■□□□□ 0.01
APCP25054 AC068137.2-201ENST00000605408 478 ntBASIC15.09■□□□□ 0.01
APCP25054 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.09■□□□□ 0.01
APCP25054 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.09■□□□□ 0.01
APCP25054 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 AC096633.1-201ENST00000422446 749 ntBASIC15.09■□□□□ 0.01
APCP25054 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.09■□□□□ 0.01
APCP25054 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.09■□□□□ 0.01
APCP25054 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
APCP25054 AC004706.3-202ENST00000621574 984 ntBASIC15.09■□□□□ 0.01
APCP25054 AC009093.7-201ENST00000623853 1223 ntBASIC15.09■□□□□ 0.01
APCP25054 AL805961.1-202ENST00000641562 540 ntBASIC15.09■□□□□ 0.01
APCP25054 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
APCP25054 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.09■□□□□ 0.01
APCP25054 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
APCP25054 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.09■□□□□ 0.01
APCP25054 AL158211.5-201ENST00000623583 2518 ntBASIC15.09■□□□□ 0.01
APCP25054 AC025580.3-201ENST00000617932 1424 ntBASIC15.09■□□□□ 0.01
APCP25054 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
APCP25054 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.08■□□□□ 0.01
APCP25054 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms