Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPN3P20807 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 AC009102.3-201ENST00000623118 1491 ntBASIC17.44■□□□□ 0.38
CAPN3P20807 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.43■□□□□ 0.38
CAPN3P20807 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.43■□□□□ 0.38
CAPN3P20807 AC106820.2-201ENST00000563775 3264 ntBASIC17.43■□□□□ 0.38
CAPN3P20807 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CAPN3P20807 AC096733.2-201ENST00000609937 1394 ntBASIC17.43■□□□□ 0.38
CAPN3P20807 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 KRT18P55-202ENST00000578578 1546 ntBASIC17.43■□□□□ 0.38
CAPN3P20807 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CAPN3P20807 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CAPN3P20807 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CAPN3P20807 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 RBM17P1-201ENST00000453646 1190 ntBASIC17.43■□□□□ 0.38
CAPN3P20807 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.43■□□□□ 0.38
CAPN3P20807 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CAPN3P20807 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CAPN3P20807 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.43■□□□□ 0.38
CAPN3P20807 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.43■□□□□ 0.38
CAPN3P20807 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CAPN3P20807 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CAPN3P20807 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN3P20807 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.43■□□□□ 0.38
CAPN3P20807 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.42■□□□□ 0.38
CAPN3P20807 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 MIR149-201ENST00000384879 89 ntBASIC17.42■□□□□ 0.38
CAPN3P20807 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.42■□□□□ 0.38
CAPN3P20807 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.42■□□□□ 0.38
CAPN3P20807 MIR4674-201ENST00000582457 87 ntBASIC17.42■□□□□ 0.38
CAPN3P20807 NTF6B-201ENST00000591913 560 ntBASIC17.42■□□□□ 0.38
CAPN3P20807 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.42■□□□□ 0.38
CAPN3P20807 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.42■□□□□ 0.38
CAPN3P20807 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CAPN3P20807 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.42■□□□□ 0.38
CAPN3P20807 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 FSCN1P1-201ENST00000568912 1481 ntBASIC17.42■□□□□ 0.38
CAPN3P20807 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN3P20807 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CAPN3P20807 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CAPN3P20807 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CAPN3P20807 AC036111.1-201ENST00000533973 1582 ntBASIC17.41■□□□□ 0.38
CAPN3P20807 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CAPN3P20807 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.41■□□□□ 0.38
CAPN3P20807 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 TERF1P1-201ENST00000311003 1181 ntBASIC17.41■□□□□ 0.38
CAPN3P20807 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CAPN3P20807 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPN3P20807 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CAPN3P20807 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CAPN3P20807 FAM197Y1-201ENST00000421178 764 ntBASIC17.41■□□□□ 0.38
CAPN3P20807 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPN3P20807 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CAPN3P20807 DUX4L26-201ENST00000489078 1255 ntBASIC17.41■□□□□ 0.38
CAPN3P20807 NUDT16P1-203ENST00000513809 620 ntBASIC17.41■□□□□ 0.38
CAPN3P20807 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.41■□□□□ 0.38
CAPN3P20807 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CAPN3P20807 MIR3180-5-201ENST00000583743 153 ntBASIC17.41■□□□□ 0.38
CAPN3P20807 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPN3P20807 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPN3P20807 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.41■□□□□ 0.38
CAPN3P20807 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms