Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC30.8■■■□□ 2.52
CFTRP13569 WBP2-203ENST00000433525 928 ntTSL 2 BASIC30.8■■■□□ 2.52
CFTRP13569 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CFTRP13569 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC30.8■■■□□ 2.52
CFTRP13569 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC30.8■■■□□ 2.52
CFTRP13569 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC30.8■■■□□ 2.52
CFTRP13569 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
CFTRP13569 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CFTRP13569 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CFTRP13569 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CFTRP13569 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CFTRP13569 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CFTRP13569 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CFTRP13569 AC103564.2-201ENST00000432853 1299 ntBASIC30.79■■■□□ 2.52
CFTRP13569 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CFTRP13569 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
CFTRP13569 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CFTRP13569 GID4-202ENST00000376345 1391 ntTSL 3 BASIC30.79■■■□□ 2.52
CFTRP13569 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC30.79■■■□□ 2.52
CFTRP13569 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CFTRP13569 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC30.78■■■□□ 2.52
CFTRP13569 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CFTRP13569 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CFTRP13569 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CFTRP13569 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CFTRP13569 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC30.78■■■□□ 2.52
CFTRP13569 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CFTRP13569 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CFTRP13569 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC30.78■■■□□ 2.52
CFTRP13569 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CFTRP13569 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CFTRP13569 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CFTRP13569 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC30.78■■■□□ 2.52
CFTRP13569 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CFTRP13569 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC30.78■■■□□ 2.52
CFTRP13569 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC30.78■■■□□ 2.52
CFTRP13569 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC30.78■■■□□ 2.52
CFTRP13569 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CFTRP13569 COBL-210ENST00000632460 1941 ntTSL 5 BASIC30.77■■■□□ 2.52
CFTRP13569 AC093484.2-201ENST00000580996 2166 ntBASIC30.77■■■□□ 2.52
CFTRP13569 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CFTRP13569 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
CFTRP13569 ACTG1P14-201ENST00000446382 1122 ntBASIC30.77■■■□□ 2.52
CFTRP13569 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CFTRP13569 LSM12-202ENST00000585388 942 ntTSL 3 BASIC30.77■■■□□ 2.52
CFTRP13569 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC30.77■■■□□ 2.52
CFTRP13569 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CFTRP13569 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC30.77■■■□□ 2.52
CFTRP13569 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CFTRP13569 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC30.76■■■□□ 2.52
CFTRP13569 ADH5P3-201ENST00000433842 1137 ntBASIC30.76■■■□□ 2.52
CFTRP13569 AC096734.2-201ENST00000562054 433 ntBASIC30.76■■■□□ 2.52
CFTRP13569 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC30.76■■■□□ 2.52
CFTRP13569 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC30.76■■■□□ 2.52
CFTRP13569 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CFTRP13569 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CFTRP13569 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CFTRP13569 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC30.76■■■□□ 2.52
CFTRP13569 USP39-202ENST00000409025 1946 ntTSL 5 BASIC30.76■■■□□ 2.52
CFTRP13569 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC30.76■■■□□ 2.51
CFTRP13569 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
CFTRP13569 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CFTRP13569 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC30.76■■■□□ 2.51
CFTRP13569 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC30.76■■■□□ 2.51
CFTRP13569 AC005498.2-205ENST00000593218 784 ntBASIC30.76■■■□□ 2.51
CFTRP13569 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC30.75■■■□□ 2.51
CFTRP13569 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
CFTRP13569 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
CFTRP13569 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 ME2-218ENST00000640965 2476 ntTSL 5 BASIC30.75■■■□□ 2.51
CFTRP13569 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC30.75■■■□□ 2.51
CFTRP13569 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC30.75■■■□□ 2.51
CFTRP13569 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 PON3-205ENST00000451904 1053 ntTSL 3 BASIC30.75■■■□□ 2.51
CFTRP13569 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC30.75■■■□□ 2.51
CFTRP13569 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 AC091812.2-201ENST00000619081 385 ntBASIC30.75■■■□□ 2.51
CFTRP13569 AC004877.2-201ENST00000623941 599 ntBASIC30.75■■■□□ 2.51
CFTRP13569 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CFTRP13569 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
CFTRP13569 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CFTRP13569 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CFTRP13569 AL049757.1-201ENST00000616842 1596 ntBASIC30.74■■■□□ 2.51
CFTRP13569 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
CFTRP13569 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CFTRP13569 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CFTRP13569 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC30.74■■■□□ 2.51
CFTRP13569 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC30.74■■■□□ 2.51
CFTRP13569 FAM58CP-201ENST00000435741 640 ntBASIC30.74■■■□□ 2.51
CFTRP13569 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC30.74■■■□□ 2.51
CFTRP13569 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms