Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.86■□□□□ 0.77
HOXD8P13378 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXD8P13378 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXD8P13378 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXD8P13378 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXD8P13378 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXD8P13378 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXD8P13378 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXD8P13378 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXD8P13378 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.85■□□□□ 0.77
HOXD8P13378 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXD8P13378 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
HOXD8P13378 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXD8P13378 AC098831.1-202ENST00000438821 336 ntBASIC19.85■□□□□ 0.77
HOXD8P13378 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
HOXD8P13378 PRYP5-201ENST00000451909 266 ntBASIC19.85■□□□□ 0.77
HOXD8P13378 POLD2P1-201ENST00000511220 997 ntBASIC19.85■□□□□ 0.77
HOXD8P13378 PGAM5P1-201ENST00000518923 814 ntBASIC19.85■□□□□ 0.77
HOXD8P13378 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXD8P13378 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.85■□□□□ 0.77
HOXD8P13378 AC034105.1-201ENST00000563488 319 ntBASIC19.85■□□□□ 0.77
HOXD8P13378 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HOXD8P13378 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
HOXD8P13378 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXD8P13378 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXD8P13378 PMS2P7-201ENST00000506558 1336 ntBASIC19.84■□□□□ 0.77
HOXD8P13378 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXD8P13378 AC022898.2-201ENST00000616822 1312 ntBASIC19.84■□□□□ 0.77
HOXD8P13378 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HOXD8P13378 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HOXD8P13378 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.84■□□□□ 0.77
HOXD8P13378 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HOXD8P13378 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXD8P13378 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXD8P13378 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXD8P13378 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HOXD8P13378 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXD8P13378 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXD8P13378 AC139530.3-201ENST00000620344 690 ntBASIC19.84■□□□□ 0.77
HOXD8P13378 AL022326.1-202ENST00000641533 845 ntBASIC19.84■□□□□ 0.77
HOXD8P13378 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.84■□□□□ 0.77
HOXD8P13378 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXD8P13378 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXD8P13378 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HOXD8P13378 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HOXD8P13378 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HOXD8P13378 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXD8P13378 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXD8P13378 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXD8P13378 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXD8P13378 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXD8P13378 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXD8P13378 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXD8P13378 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXD8P13378 AC103564.2-201ENST00000432853 1299 ntBASIC19.83■□□□□ 0.77
HOXD8P13378 AC105339.3-201ENST00000560043 636 ntBASIC19.83■□□□□ 0.77
HOXD8P13378 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXD8P13378 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.83■□□□□ 0.76
HOXD8P13378 AC104109.2-201ENST00000602919 1418 ntBASIC19.83■□□□□ 0.76
HOXD8P13378 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HOXD8P13378 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.83■□□□□ 0.76
HOXD8P13378 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXD8P13378 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
HOXD8P13378 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.83■□□□□ 0.76
HOXD8P13378 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.83■□□□□ 0.76
HOXD8P13378 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD8P13378 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXD8P13378 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.82■□□□□ 0.76
HOXD8P13378 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD8P13378 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXD8P13378 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HOXD8P13378 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HOXD8P13378 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD8P13378 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD8P13378 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms