Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.02■□□□□ 0.32
CCL4P13236 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.02■□□□□ 0.32
CCL4P13236 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.02■□□□□ 0.32
CCL4P13236 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.02■□□□□ 0.32
CCL4P13236 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.02■□□□□ 0.32
CCL4P13236 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCL4P13236 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL4P13236 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCL4P13236 ESPNP-201ENST00000270691 2015 ntBASIC17.02■□□□□ 0.32
CCL4P13236 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CCL4P13236 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CCL4P13236 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCL4P13236 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.02■□□□□ 0.31
CCL4P13236 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCL4P13236 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCL4P13236 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCL4P13236 AC126763.1-201ENST00000552015 2118 ntBASIC17.02■□□□□ 0.31
CCL4P13236 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCL4P13236 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.01■□□□□ 0.31
CCL4P13236 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.01■□□□□ 0.31
CCL4P13236 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCL4P13236 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
CCL4P13236 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.01■□□□□ 0.31
CCL4P13236 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCL4P13236 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCL4P13236 FAM220CP-201ENST00000395253 831 ntBASIC17.01■□□□□ 0.31
CCL4P13236 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.01■□□□□ 0.31
CCL4P13236 AC007967.3-201ENST00000434308 558 ntBASIC17.01■□□□□ 0.31
CCL4P13236 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.01■□□□□ 0.31
CCL4P13236 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCL4P13236 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.01■□□□□ 0.31
CCL4P13236 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 AC145285.3-201ENST00000564603 959 ntBASIC17.01■□□□□ 0.31
CCL4P13236 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.01■□□□□ 0.31
CCL4P13236 MTDHP4-201ENST00000600287 670 ntBASIC17.01■□□□□ 0.31
CCL4P13236 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CCL4P13236 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.01■□□□□ 0.31
CCL4P13236 AL139288.1-201ENST00000623748 933 ntBASIC17.01■□□□□ 0.31
CCL4P13236 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.01■□□□□ 0.31
CCL4P13236 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.01■□□□□ 0.31
CCL4P13236 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCL4P13236 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
CCL4P13236 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCL4P13236 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCL4P13236 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCL4P13236 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCL4P13236 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CCL4P13236 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17■□□□□ 0.31
CCL4P13236 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17■□□□□ 0.31
CCL4P13236 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17■□□□□ 0.31
CCL4P13236 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17■□□□□ 0.31
CCL4P13236 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CCL4P13236 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17■□□□□ 0.31
CCL4P13236 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17■□□□□ 0.31
CCL4P13236 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17■□□□□ 0.31
CCL4P13236 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17■□□□□ 0.31
CCL4P13236 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17■□□□□ 0.31
CCL4P13236 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCL4P13236 AP000867.4-201ENST00000641616 219 ntBASIC17■□□□□ 0.31
CCL4P13236 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCL4P13236 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCL4P13236 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCL4P13236 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17■□□□□ 0.31
CCL4P13236 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17■□□□□ 0.31
CCL4P13236 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17■□□□□ 0.31
CCL4P13236 TBC1D3P5-201ENST00000579401 1545 ntBASIC17■□□□□ 0.31
CCL4P13236 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17■□□□□ 0.31
CCL4P13236 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCL4P13236 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCL4P13236 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCL4P13236 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCL4P13236 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.99■□□□□ 0.31
CCL4P13236 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCL4P13236 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.99■□□□□ 0.31
CCL4P13236 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCL4P13236 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCL4P13236 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCL4P13236 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCL4P13236 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.99■□□□□ 0.31
CCL4P13236 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.99■□□□□ 0.31
CCL4P13236 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCL4P13236 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.99■□□□□ 0.31
CCL4P13236 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.99■□□□□ 0.31
CCL4P13236 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.99■□□□□ 0.31
CCL4P13236 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.99■□□□□ 0.31
CCL4P13236 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.99■□□□□ 0.31
CCL4P13236 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.99■□□□□ 0.31
CCL4P13236 RNA5SP415-201ENST00000517246 115 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms