Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.63■□□□□ 0.25
BMP4P12644 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
BMP4P12644 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.63■□□□□ 0.25
BMP4P12644 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.63■□□□□ 0.25
BMP4P12644 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.63■□□□□ 0.25
BMP4P12644 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 AC128688.1-201ENST00000487626 519 ntBASIC16.63■□□□□ 0.25
BMP4P12644 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.63■□□□□ 0.25
BMP4P12644 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.63■□□□□ 0.25
BMP4P12644 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.63■□□□□ 0.25
BMP4P12644 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.63■□□□□ 0.25
BMP4P12644 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.63■□□□□ 0.25
BMP4P12644 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BMP4P12644 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.63■□□□□ 0.25
BMP4P12644 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.63■□□□□ 0.25
BMP4P12644 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
BMP4P12644 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
BMP4P12644 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.63■□□□□ 0.25
BMP4P12644 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.63■□□□□ 0.25
BMP4P12644 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.63■□□□□ 0.25
BMP4P12644 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.62■□□□□ 0.25
BMP4P12644 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.62■□□□□ 0.25
BMP4P12644 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
BMP4P12644 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.62■□□□□ 0.25
BMP4P12644 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.62■□□□□ 0.25
BMP4P12644 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.62■□□□□ 0.25
BMP4P12644 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.62■□□□□ 0.25
BMP4P12644 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.62■□□□□ 0.25
BMP4P12644 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.62■□□□□ 0.25
BMP4P12644 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.62■□□□□ 0.25
BMP4P12644 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
BMP4P12644 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.62■□□□□ 0.25
BMP4P12644 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.62■□□□□ 0.25
BMP4P12644 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.62■□□□□ 0.25
BMP4P12644 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.62■□□□□ 0.25
BMP4P12644 UBALD1-205ENST00000590891 2641 ntBASIC16.62■□□□□ 0.25
BMP4P12644 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 KRT8P8-201ENST00000434750 1448 ntBASIC16.62■□□□□ 0.25
BMP4P12644 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.62■□□□□ 0.25
BMP4P12644 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BMP4P12644 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BMP4P12644 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
BMP4P12644 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.61■□□□□ 0.25
BMP4P12644 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.61■□□□□ 0.25
BMP4P12644 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.61■□□□□ 0.25
BMP4P12644 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.61■□□□□ 0.25
BMP4P12644 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
BMP4P12644 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.61■□□□□ 0.25
BMP4P12644 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.61■□□□□ 0.25
BMP4P12644 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BMP4P12644 AP005242.2-201ENST00000580065 1175 ntBASIC16.61■□□□□ 0.25
BMP4P12644 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.61■□□□□ 0.25
BMP4P12644 PCDH8P1-201ENST00000428983 2773 ntBASIC16.61■□□□□ 0.25
BMP4P12644 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
BMP4P12644 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.61■□□□□ 0.25
BMP4P12644 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BMP4P12644 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
BMP4P12644 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.61■□□□□ 0.25
BMP4P12644 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BMP4P12644 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
BMP4P12644 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms