Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.9■□□□□ 0.14
UBCP0CG48 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.9■□□□□ 0.14
UBCP0CG48 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.89■□□□□ 0.14
UBCP0CG48 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.89■□□□□ 0.13
UBCP0CG48 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.89■□□□□ 0.13
UBCP0CG48 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.89■□□□□ 0.13
UBCP0CG48 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 KRT18P55-202ENST00000578578 1546 ntBASIC15.89■□□□□ 0.13
UBCP0CG48 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.89■□□□□ 0.13
UBCP0CG48 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.89■□□□□ 0.13
UBCP0CG48 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.89■□□□□ 0.13
UBCP0CG48 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.89■□□□□ 0.13
UBCP0CG48 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.89■□□□□ 0.13
UBCP0CG48 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.89■□□□□ 0.13
UBCP0CG48 WWOX-216ENST00000569818 525 ntBASIC15.89■□□□□ 0.13
UBCP0CG48 MIR3180-4-201ENST00000582223 153 ntBASIC15.89■□□□□ 0.13
UBCP0CG48 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.89■□□□□ 0.13
UBCP0CG48 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
UBCP0CG48 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBCP0CG48 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
UBCP0CG48 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.89■□□□□ 0.13
UBCP0CG48 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
UBCP0CG48 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
UBCP0CG48 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
UBCP0CG48 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
UBCP0CG48 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
UBCP0CG48 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
UBCP0CG48 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
UBCP0CG48 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
UBCP0CG48 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.88■□□□□ 0.13
UBCP0CG48 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.88■□□□□ 0.13
UBCP0CG48 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.88■□□□□ 0.13
UBCP0CG48 AC026471.5-201ENST00000615068 467 ntBASIC15.88■□□□□ 0.13
UBCP0CG48 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.88■□□□□ 0.13
UBCP0CG48 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
UBCP0CG48 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.88■□□□□ 0.13
UBCP0CG48 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
UBCP0CG48 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBCP0CG48 AC099343.3-201ENST00000605834 2503 ntBASIC15.88■□□□□ 0.13
UBCP0CG48 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.88■□□□□ 0.13
UBCP0CG48 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
UBCP0CG48 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.87■□□□□ 0.13
UBCP0CG48 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
UBCP0CG48 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.87■□□□□ 0.13
UBCP0CG48 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
UBCP0CG48 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
UBCP0CG48 PRORSD1P-201ENST00000295112 541 ntBASIC15.87■□□□□ 0.13
UBCP0CG48 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.87■□□□□ 0.13
UBCP0CG48 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.87■□□□□ 0.13
UBCP0CG48 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.87■□□□□ 0.13
UBCP0CG48 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.87■□□□□ 0.13
UBCP0CG48 CCR12P-201ENST00000446203 998 ntBASIC15.87■□□□□ 0.13
UBCP0CG48 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBCP0CG48 AP003041.3-201ENST00000527151 707 ntBASIC15.87■□□□□ 0.13
UBCP0CG48 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.87■□□□□ 0.13
UBCP0CG48 AL353719.1-201ENST00000566847 864 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms