Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.43■□□□□ 0.22
FREM3P0C091 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
FREM3P0C091 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 GUSBP12-201ENST00000513727 720 ntBASIC16.42■□□□□ 0.22
FREM3P0C091 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.42■□□□□ 0.22
FREM3P0C091 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.42■□□□□ 0.22
FREM3P0C091 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.42■□□□□ 0.22
FREM3P0C091 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.42■□□□□ 0.22
FREM3P0C091 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.42■□□□□ 0.22
FREM3P0C091 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.42■□□□□ 0.22
FREM3P0C091 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.42■□□□□ 0.22
FREM3P0C091 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.42■□□□□ 0.22
FREM3P0C091 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.42■□□□□ 0.22
FREM3P0C091 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
FREM3P0C091 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.42■□□□□ 0.22
FREM3P0C091 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
FREM3P0C091 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.42■□□□□ 0.22
FREM3P0C091 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
FREM3P0C091 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.42■□□□□ 0.22
FREM3P0C091 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.42■□□□□ 0.22
FREM3P0C091 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.42■□□□□ 0.22
FREM3P0C091 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.42■□□□□ 0.22
FREM3P0C091 AC026471.1-201ENST00000564629 3026 ntBASIC16.42■□□□□ 0.22
FREM3P0C091 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FREM3P0C091 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
FREM3P0C091 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 ABALON-201ENST00000629058 1903 ntBASIC16.41■□□□□ 0.22
FREM3P0C091 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
FREM3P0C091 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
FREM3P0C091 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.41■□□□□ 0.22
FREM3P0C091 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
FREM3P0C091 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FREM3P0C091 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FREM3P0C091 VENTXP7-201ENST00000475503 772 ntBASIC16.4■□□□□ 0.22
FREM3P0C091 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.4■□□□□ 0.22
FREM3P0C091 UNC93B7-201ENST00000509439 705 ntBASIC16.4■□□□□ 0.22
FREM3P0C091 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.4■□□□□ 0.22
FREM3P0C091 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.4■□□□□ 0.22
FREM3P0C091 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
FREM3P0C091 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
FREM3P0C091 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.4■□□□□ 0.22
FREM3P0C091 LINC00265-3P-201ENST00000447588 903 ntBASIC16.4■□□□□ 0.22
FREM3P0C091 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.4■□□□□ 0.22
FREM3P0C091 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.4■□□□□ 0.22
FREM3P0C091 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.4■□□□□ 0.22
FREM3P0C091 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
FREM3P0C091 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.4■□□□□ 0.22
FREM3P0C091 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FREM3P0C091 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
FREM3P0C091 AC009102.3-201ENST00000623118 1491 ntBASIC16.39■□□□□ 0.22
FREM3P0C091 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FREM3P0C091 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms