Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC6P09630 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HOXC6P09630 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.37■□□□□ 0.85
HOXC6P09630 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC6P09630 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
HOXC6P09630 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.37■□□□□ 0.85
HOXC6P09630 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC6P09630 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.37■□□□□ 0.85
HOXC6P09630 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.37■□□□□ 0.85
HOXC6P09630 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.37■□□□□ 0.85
HOXC6P09630 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.37■□□□□ 0.85
HOXC6P09630 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.37■□□□□ 0.85
HOXC6P09630 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.37■□□□□ 0.85
HOXC6P09630 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.37■□□□□ 0.85
HOXC6P09630 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.37■□□□□ 0.85
HOXC6P09630 AL139424.1-201ENST00000607572 797 ntBASIC20.37■□□□□ 0.85
HOXC6P09630 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC6P09630 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC6P09630 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC6P09630 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HOXC6P09630 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC6P09630 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC6P09630 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.37■□□□□ 0.85
HOXC6P09630 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HOXC6P09630 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC6P09630 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC6P09630 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC6P09630 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.36■□□□□ 0.85
HOXC6P09630 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC6P09630 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC6P09630 AC009947.1-201ENST00000444350 727 ntBASIC20.36■□□□□ 0.85
HOXC6P09630 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXC6P09630 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.36■□□□□ 0.85
HOXC6P09630 RNA5SP416-201ENST00000516838 111 ntBASIC20.36■□□□□ 0.85
HOXC6P09630 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
HOXC6P09630 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.36■□□□□ 0.85
HOXC6P09630 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
HOXC6P09630 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXC6P09630 AC073592.4-201ENST00000623827 446 ntBASIC20.36■□□□□ 0.85
HOXC6P09630 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.36■□□□□ 0.85
HOXC6P09630 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC6P09630 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXC6P09630 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXC6P09630 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
HOXC6P09630 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC6P09630 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC6P09630 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HOXC6P09630 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC6P09630 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.35■□□□□ 0.85
HOXC6P09630 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HOXC6P09630 AL499627.1-201ENST00000569373 2188 ntBASIC20.35■□□□□ 0.85
HOXC6P09630 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.35■□□□□ 0.85
HOXC6P09630 AC079776.2-201ENST00000641154 1609 ntBASIC20.35■□□□□ 0.85
HOXC6P09630 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.35■□□□□ 0.85
HOXC6P09630 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HOXC6P09630 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC6P09630 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC6P09630 PMS2P2-201ENST00000425039 1128 ntBASIC20.35■□□□□ 0.85
HOXC6P09630 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.35■□□□□ 0.85
HOXC6P09630 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
HOXC6P09630 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.35■□□□□ 0.85
HOXC6P09630 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.35■□□□□ 0.85
HOXC6P09630 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
HOXC6P09630 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.35■□□□□ 0.85
HOXC6P09630 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
HOXC6P09630 MIR3687-2-201ENST00000577708 61 ntBASIC20.35■□□□□ 0.85
HOXC6P09630 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.35■□□□□ 0.85
HOXC6P09630 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.35■□□□□ 0.85
HOXC6P09630 MIR3687-1-201ENST00000614492 61 ntBASIC20.35■□□□□ 0.85
HOXC6P09630 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC6P09630 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC6P09630 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC6P09630 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC6P09630 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC6P09630 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.35■□□□□ 0.85
HOXC6P09630 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC6P09630 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC6P09630 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HOXC6P09630 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC6P09630 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC6P09630 PMPCAP1-201ENST00000508114 1576 ntBASIC20.34■□□□□ 0.85
HOXC6P09630 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
HOXC6P09630 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC6P09630 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC6P09630 KRT18P27-201ENST00000427733 1299 ntBASIC20.34■□□□□ 0.85
HOXC6P09630 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.34■□□□□ 0.85
HOXC6P09630 AC007967.3-201ENST00000434308 558 ntBASIC20.34■□□□□ 0.85
HOXC6P09630 AC004967.1-201ENST00000453589 447 ntBASIC20.34■□□□□ 0.85
HOXC6P09630 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.34■□□□□ 0.85
HOXC6P09630 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC6P09630 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
HOXC6P09630 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC6P09630 AC079781.4-201ENST00000641908 219 ntBASIC20.34■□□□□ 0.85
HOXC6P09630 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC6P09630 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC6P09630 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC6P09630 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC6P09630 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC6P09630 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC6P09630 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms