Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.96■□□□□ 0.79
TPM1P09493 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 MIR6786-201ENST00000616843 113 ntBASIC19.96■□□□□ 0.79
TPM1P09493 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.96■□□□□ 0.79
TPM1P09493 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM1P09493 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TPM1P09493 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TPM1P09493 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.96■□□□□ 0.79
TPM1P09493 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM1P09493 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TPM1P09493 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.96■□□□□ 0.79
TPM1P09493 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM1P09493 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TPM1P09493 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TPM1P09493 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TPM1P09493 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM1P09493 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM1P09493 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM1P09493 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.95■□□□□ 0.78
TPM1P09493 AC008622.2-201ENST00000617006 1229 ntBASIC19.95■□□□□ 0.78
TPM1P09493 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TPM1P09493 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TPM1P09493 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.95■□□□□ 0.78
TPM1P09493 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TPM1P09493 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TPM1P09493 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TPM1P09493 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TPM1P09493 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TPM1P09493 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 AC009102.3-201ENST00000623118 1491 ntBASIC19.94■□□□□ 0.78
TPM1P09493 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TPM1P09493 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.94■□□□□ 0.78
TPM1P09493 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TPM1P09493 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TPM1P09493 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.94■□□□□ 0.78
TPM1P09493 ESRRAP1-201ENST00000400596 1257 ntBASIC19.94■□□□□ 0.78
TPM1P09493 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.94■□□□□ 0.78
TPM1P09493 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.94■□□□□ 0.78
TPM1P09493 AC073195.1-201ENST00000607241 877 ntBASIC19.94■□□□□ 0.78
TPM1P09493 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.94■□□□□ 0.78
TPM1P09493 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.94■□□□□ 0.78
TPM1P09493 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TPM1P09493 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TPM1P09493 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.94■□□□□ 0.78
TPM1P09493 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.93■□□□□ 0.78
TPM1P09493 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 B3GAT3P1-201ENST00000471720 806 ntBASIC19.93■□□□□ 0.78
TPM1P09493 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
TPM1P09493 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.93■□□□□ 0.78
TPM1P09493 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.93■□□□□ 0.78
TPM1P09493 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
TPM1P09493 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms