Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 GMCL1P1-201ENST00000463439 1581 ntBASIC18.47■□□□□ 0.55
MT-ND3P03897 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.47■□□□□ 0.55
MT-ND3P03897 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
MT-ND3P03897 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 MESTP1-201ENST00000404287 994 ntBASIC18.47■□□□□ 0.55
MT-ND3P03897 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-ND3P03897 AC097488.1-201ENST00000507834 756 ntBASIC18.47■□□□□ 0.55
MT-ND3P03897 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-ND3P03897 EGLN1P1-201ENST00000531623 762 ntBASIC18.47■□□□□ 0.55
MT-ND3P03897 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
MT-ND3P03897 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
MT-ND3P03897 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
MT-ND3P03897 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-ND3P03897 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-ND3P03897 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-ND3P03897 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
MT-ND3P03897 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.46■□□□□ 0.55
MT-ND3P03897 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND3P03897 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND3P03897 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND3P03897 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.46■□□□□ 0.55
MT-ND3P03897 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
MT-ND3P03897 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.46■□□□□ 0.55
MT-ND3P03897 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND3P03897 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND3P03897 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND3P03897 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND3P03897 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND3P03897 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND3P03897 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
MT-ND3P03897 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.46■□□□□ 0.55
MT-ND3P03897 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
MT-ND3P03897 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
MT-ND3P03897 SLC25A3P1-201ENST00000443844 931 ntBASIC18.46■□□□□ 0.55
MT-ND3P03897 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.46■□□□□ 0.55
MT-ND3P03897 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.46■□□□□ 0.55
MT-ND3P03897 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND3P03897 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND3P03897 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
MT-ND3P03897 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
MT-ND3P03897 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
MT-ND3P03897 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 SIRPAP1-201ENST00000448467 1770 ntBASIC18.45■□□□□ 0.54
MT-ND3P03897 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.45■□□□□ 0.54
MT-ND3P03897 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 AP000593.1-201ENST00000393668 712 ntBASIC18.45■□□□□ 0.54
MT-ND3P03897 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.45■□□□□ 0.54
MT-ND3P03897 CRYGFP-201ENST00000418459 633 ntBASIC18.45■□□□□ 0.54
MT-ND3P03897 LIN28AP1-201ENST00000429574 405 ntBASIC18.45■□□□□ 0.54
MT-ND3P03897 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.45■□□□□ 0.54
MT-ND3P03897 AC011506.1-201ENST00000474329 610 ntBASIC18.45■□□□□ 0.54
MT-ND3P03897 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.45■□□□□ 0.54
MT-ND3P03897 CKBP1-201ENST00000565489 1086 ntBASIC18.45■□□□□ 0.54
MT-ND3P03897 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.45■□□□□ 0.54
MT-ND3P03897 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.45■□□□□ 0.54
MT-ND3P03897 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 AC012317.2-201ENST00000623305 2251 ntBASIC18.45■□□□□ 0.54
MT-ND3P03897 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.45■□□□□ 0.54
MT-ND3P03897 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
MT-ND3P03897 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.45■□□□□ 0.54
MT-ND3P03897 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND3P03897 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.45■□□□□ 0.54
MT-ND3P03897 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.44■□□□□ 0.54
MT-ND3P03897 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.44■□□□□ 0.54
MT-ND3P03897 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.44■□□□□ 0.54
MT-ND3P03897 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 TSPY14P-201ENST00000303979 915 ntBASIC18.44■□□□□ 0.54
MT-ND3P03897 TERF1P1-201ENST00000311003 1181 ntBASIC18.44■□□□□ 0.54
MT-ND3P03897 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms