Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
VEGFDO43915 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VEGFDO43915 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VEGFDO43915 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VEGFDO43915 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.72■□□□□ 0.43
VEGFDO43915 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VEGFDO43915 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
VEGFDO43915 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
VEGFDO43915 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.72■□□□□ 0.43
VEGFDO43915 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 KRT17P6-201ENST00000453795 1220 ntBASIC17.72■□□□□ 0.43
VEGFDO43915 AC104819.1-201ENST00000504587 486 ntBASIC17.72■□□□□ 0.43
VEGFDO43915 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.72■□□□□ 0.43
VEGFDO43915 MIR3652-201ENST00000579335 131 ntBASIC17.72■□□□□ 0.43
VEGFDO43915 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.72■□□□□ 0.43
VEGFDO43915 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.72■□□□□ 0.43
VEGFDO43915 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.72■□□□□ 0.43
VEGFDO43915 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
VEGFDO43915 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
VEGFDO43915 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VEGFDO43915 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VEGFDO43915 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.71■□□□□ 0.43
VEGFDO43915 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VEGFDO43915 REXO1L9P-201ENST00000604264 2108 ntBASIC17.71■□□□□ 0.43
VEGFDO43915 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VEGFDO43915 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.71■□□□□ 0.43
VEGFDO43915 ABALON-201ENST00000629058 1903 ntBASIC17.71■□□□□ 0.43
VEGFDO43915 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
VEGFDO43915 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
VEGFDO43915 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VEGFDO43915 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VEGFDO43915 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.71■□□□□ 0.43
VEGFDO43915 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.71■□□□□ 0.43
VEGFDO43915 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VEGFDO43915 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.71■□□□□ 0.43
VEGFDO43915 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.71■□□□□ 0.43
VEGFDO43915 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.71■□□□□ 0.43
VEGFDO43915 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
VEGFDO43915 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.71■□□□□ 0.43
VEGFDO43915 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VEGFDO43915 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VEGFDO43915 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VEGFDO43915 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VEGFDO43915 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.71■□□□□ 0.43
VEGFDO43915 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VEGFDO43915 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VEGFDO43915 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
VEGFDO43915 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VEGFDO43915 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VEGFDO43915 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VEGFDO43915 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
VEGFDO43915 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.7■□□□□ 0.42
VEGFDO43915 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.7■□□□□ 0.42
VEGFDO43915 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.7■□□□□ 0.42
VEGFDO43915 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
VEGFDO43915 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
VEGFDO43915 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
VEGFDO43915 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.7■□□□□ 0.42
VEGFDO43915 NUS1P1-201ENST00000446295 882 ntBASIC17.7■□□□□ 0.42
VEGFDO43915 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
VEGFDO43915 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.7■□□□□ 0.42
VEGFDO43915 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.7■□□□□ 0.42
VEGFDO43915 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.7■□□□□ 0.42
VEGFDO43915 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.7■□□□□ 0.42
VEGFDO43915 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VEGFDO43915 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.7■□□□□ 0.42
VEGFDO43915 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VEGFDO43915 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VEGFDO43915 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms