Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.03■□□□□ 0.48
PHGDHO43175 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.03■□□□□ 0.48
PHGDHO43175 AC010240.3-201ENST00000607688 395 ntBASIC18.03■□□□□ 0.48
PHGDHO43175 AC010653.2-201ENST00000623505 997 ntBASIC18.03■□□□□ 0.48
PHGDHO43175 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.03■□□□□ 0.48
PHGDHO43175 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PHGDHO43175 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.03■□□□□ 0.48
PHGDHO43175 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PHGDHO43175 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.03■□□□□ 0.48
PHGDHO43175 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.03■□□□□ 0.48
PHGDHO43175 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHGDHO43175 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PHGDHO43175 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHGDHO43175 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.02■□□□□ 0.48
PHGDHO43175 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHGDHO43175 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PHGDHO43175 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHGDHO43175 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.02■□□□□ 0.48
PHGDHO43175 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHGDHO43175 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHGDHO43175 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PHGDHO43175 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHGDHO43175 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
PHGDHO43175 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHGDHO43175 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PHGDHO43175 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHGDHO43175 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHGDHO43175 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHGDHO43175 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.02■□□□□ 0.48
PHGDHO43175 EGLN1P1-201ENST00000531623 762 ntBASIC18.02■□□□□ 0.48
PHGDHO43175 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHGDHO43175 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.02■□□□□ 0.48
PHGDHO43175 AC009065.1-201ENST00000564055 1225 ntBASIC18.02■□□□□ 0.48
PHGDHO43175 AC006116.8-202ENST00000587620 1550 ntBASIC18.02■□□□□ 0.48
PHGDHO43175 AP006294.2-201ENST00000641667 209 ntBASIC18.02■□□□□ 0.48
PHGDHO43175 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PHGDHO43175 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.02■□□□□ 0.47
PHGDHO43175 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PHGDHO43175 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PHGDHO43175 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PHGDHO43175 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PHGDHO43175 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.01■□□□□ 0.47
PHGDHO43175 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
PHGDHO43175 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.01■□□□□ 0.47
PHGDHO43175 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PHGDHO43175 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PHGDHO43175 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 AC009947.2-201ENST00000444014 672 ntBASIC18.01■□□□□ 0.47
PHGDHO43175 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.01■□□□□ 0.47
PHGDHO43175 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.01■□□□□ 0.47
PHGDHO43175 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.01■□□□□ 0.47
PHGDHO43175 AC024243.1-201ENST00000609234 778 ntBASIC18.01■□□□□ 0.47
PHGDHO43175 AC010947.1-201ENST00000623454 693 ntBASIC18.01■□□□□ 0.47
PHGDHO43175 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.01■□□□□ 0.47
PHGDHO43175 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.01■□□□□ 0.47
PHGDHO43175 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PHGDHO43175 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.01■□□□□ 0.47
PHGDHO43175 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PHGDHO43175 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHGDHO43175 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PHGDHO43175 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18■□□□□ 0.47
PHGDHO43175 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PHGDHO43175 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PHGDHO43175 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18■□□□□ 0.47
PHGDHO43175 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PHGDHO43175 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PHGDHO43175 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PHGDHO43175 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PHGDHO43175 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PHGDHO43175 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18■□□□□ 0.47
PHGDHO43175 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18■□□□□ 0.47
PHGDHO43175 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18■□□□□ 0.47
PHGDHO43175 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PHGDHO43175 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18■□□□□ 0.47
PHGDHO43175 GRAMD4P1-201ENST00000435181 1110 ntBASIC18■□□□□ 0.47
PHGDHO43175 SEC1P-202ENST00000473944 940 ntBASIC18■□□□□ 0.47
PHGDHO43175 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18■□□□□ 0.47
PHGDHO43175 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms