Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.14■□□□□ 0.65
SOX1O00570 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.14■□□□□ 0.65
SOX1O00570 SLC25A39P2-201ENST00000537614 270 ntBASIC19.14■□□□□ 0.65
SOX1O00570 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.14■□□□□ 0.65
SOX1O00570 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.14■□□□□ 0.65
SOX1O00570 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.14■□□□□ 0.65
SOX1O00570 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SOX1O00570 AL136317.3-201ENST00000618497 906 ntBASIC19.14■□□□□ 0.65
SOX1O00570 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SOX1O00570 AC068587.9-201ENST00000641814 219 ntBASIC19.14■□□□□ 0.65
SOX1O00570 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SOX1O00570 AC007375.3-201ENST00000600936 2314 ntBASIC19.14■□□□□ 0.65
SOX1O00570 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.14■□□□□ 0.65
SOX1O00570 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX1O00570 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.14■□□□□ 0.65
SOX1O00570 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SOX1O00570 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SOX1O00570 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX1O00570 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.14■□□□□ 0.65
SOX1O00570 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SOX1O00570 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SOX1O00570 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX1O00570 LINC00602-201ENST00000629776 2065 ntBASIC19.13■□□□□ 0.65
SOX1O00570 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX1O00570 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX1O00570 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SOX1O00570 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX1O00570 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX1O00570 U91328.1-201ENST00000437528 223 ntBASIC19.13■□□□□ 0.65
SOX1O00570 RN7SL692P-201ENST00000464677 288 ntBASIC19.13■□□□□ 0.65
SOX1O00570 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SOX1O00570 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SOX1O00570 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SOX1O00570 IGHV3-71-201ENST00000523324 359 ntBASIC19.13■□□□□ 0.65
SOX1O00570 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.13■□□□□ 0.65
SOX1O00570 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SOX1O00570 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.13■□□□□ 0.65
SOX1O00570 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX1O00570 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SOX1O00570 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX1O00570 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX1O00570 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SOX1O00570 Z82202.1-201ENST00000623446 1880 ntBASIC19.13■□□□□ 0.65
SOX1O00570 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SOX1O00570 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.13■□□□□ 0.65
SOX1O00570 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SOX1O00570 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.12■□□□□ 0.65
SOX1O00570 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SOX1O00570 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SOX1O00570 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SOX1O00570 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.12■□□□□ 0.65
SOX1O00570 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.12■□□□□ 0.65
SOX1O00570 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SOX1O00570 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SOX1O00570 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SOX1O00570 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SOX1O00570 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.12■□□□□ 0.65
SOX1O00570 KRT8P47-201ENST00000604727 1398 ntBASIC19.12■□□□□ 0.65
SOX1O00570 AC007967.3-201ENST00000434308 558 ntBASIC19.12■□□□□ 0.65
SOX1O00570 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.12■□□□□ 0.65
SOX1O00570 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
SOX1O00570 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.12■□□□□ 0.65
SOX1O00570 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.12■□□□□ 0.65
SOX1O00570 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SOX1O00570 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.12■□□□□ 0.65
SOX1O00570 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.12■□□□□ 0.65
SOX1O00570 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
SOX1O00570 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SOX1O00570 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SOX1O00570 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SOX1O00570 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SOX1O00570 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SOX1O00570 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.12■□□□□ 0.65
SOX1O00570 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.11■□□□□ 0.65
SOX1O00570 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 SPDYE22P-201ENST00000582158 798 ntBASIC19.11■□□□□ 0.65
SOX1O00570 AC027307.3-201ENST00000594262 1100 ntBASIC19.11■□□□□ 0.65
SOX1O00570 AL662799.1-202ENST00000614205 422 ntBASIC19.11■□□□□ 0.65
SOX1O00570 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SOX1O00570 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.11■□□□□ 0.65
SOX1O00570 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SOX1O00570 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX1O00570 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.11■□□□□ 0.65
SOX1O00570 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SOX1O00570 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.11■□□□□ 0.65
SOX1O00570 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SOX1O00570 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
SOX1O00570 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX1O00570 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms