Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 TSPY7P-201ENST00000431358 1114 ntBASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PCDHA12-202ENST00000613593 2588 ntBASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms