Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 MIR564-202ENST00000385049 94 ntBASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 AC004980.1-204ENST00000429707 299 ntBASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV18A0A075B6X5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 MTDHP1-201ENST00000605323 784 ntBASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 LINC00602-201ENST00000629776 2065 ntBASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV18A0A075B6X5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.58■□□□□ 0.09
TRAV18A0A075B6X5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV18A0A075B6X5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV18A0A075B6X5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV18A0A075B6X5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV18A0A075B6X5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.09
TRAV18A0A075B6X5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 AC004951.3-201ENST00000418645 1148 ntBASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 KRT16P5-201ENST00000455284 522 ntBASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 CKBP1-201ENST00000565489 1086 ntBASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV18A0A075B6X5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms