Protein–RNA interactions for Protein: P43321

SMD3, Small nuclear ribonucleoprotein Sm D3, yeastyeast

Known RBP Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD3P43321 YBR284WYBR284W 2394 nt5.66□□□□□ -1.5
SMD3P43321 KNS1YLL019C 2214 nt5.66□□□□□ -1.5
SMD3P43321 ATP23YNR020C 813 nt5.66□□□□□ -1.5
SMD3P43321 TRS31YDR472W 852 nt5.65□□□□□ -1.5
SMD3P43321 YUR1YJL139C 1287 nt5.65□□□□□ -1.5
SMD3P43321 SEN2YLR105C 1134 nt5.65□□□□□ -1.5
SMD3P43321 PAU19YMR325W 375 nt5.65□□□□□ -1.5
SMD3P43321 CEF1YMR213W 1773 nt5.65□□□□□ -1.51
SMD3P43321 YCP4YCR004C 744 nt5.64□□□□□ -1.51
SMD3P43321 YDR415CYDR415C 1125 nt5.64□□□□□ -1.51
SMD3P43321 MSI1YBR195C 1269 nt5.64□□□□□ -1.51
SMD3P43321 SES1YDR023W 1389 nt5.64□□□□□ -1.51
SMD3P43321 NAF1YNL124W 1479 nt5.64□□□□□ -1.51
SMD3P43321 YDL177CYDL177C 513 nt5.63□□□□□ -1.51
SMD3P43321 URH1YDR400W 1023 nt5.63□□□□□ -1.51
SMD3P43321 SUF5tG(CCC)O 72 nt5.63□□□□□ -1.51
SMD3P43321 NMA2YGR010W 1188 nt5.63□□□□□ -1.51
SMD3P43321 ELP4YPL101W 1371 nt5.63□□□□□ -1.51
SMD3P43321 ISC1YER019W 1434 nt5.63□□□□□ -1.51
SMD3P43321 YML122CYML122C 381 nt5.62□□□□□ -1.51
SMD3P43321 RTC4YNL254C 1206 nt5.62□□□□□ -1.51
SMD3P43321 TOS6YNL300W 309 nt5.62□□□□□ -1.51
SMD3P43321 YHR131CYHR131C 2553 nt5.62□□□□□ -1.51
SMD3P43321 MPE1YKL059C 1326 nt5.62□□□□□ -1.51
SMD3P43321 YMR034CYMR034C 1305 nt5.62□□□□□ -1.51
SMD3P43321 DAL4YIR028W 1908 nt5.62□□□□□ -1.51
SMD3P43321 YPQ2YDR352W 954 nt5.61□□□□□ -1.51
SMD3P43321 ERP2YAL007C 648 nt5.61□□□□□ -1.51
SMD3P43321 NUP53YMR153W 1428 nt5.6□□□□□ -1.51
SMD3P43321 TUB1YML085C 1344 nt5.6□□□□□ -1.51
SMD3P43321 TAD2YJL035C 753 nt5.6□□□□□ -1.51
SMD3P43321 COX5AYNL052W 462 nt5.6□□□□□ -1.51
SMD3P43321 CYC8YBR112C 2901 nt5.6□□□□□ -1.51
SMD3P43321 IRC11YOR013W 471 nt5.59□□□□□ -1.51
SMD3P43321 YIL055CYIL055C 1884 nt5.59□□□□□ -1.51
SMD3P43321 YPT1YFL038C 621 nt5.58□□□□□ -1.52
SMD3P43321 CBR1YIL043C 855 nt5.58□□□□□ -1.52
SMD3P43321 NFS1YCL017C 1494 nt5.58□□□□□ -1.52
SMD3P43321 POP1YNL221C 2628 nt5.57□□□□□ -1.52
SMD3P43321 YDR476CYDR476C 675 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)BtG(GCC)B 71 nt5.57□□□□□ -1.52
SMD3P43321 SUF16tG(GCC)C 71 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)D1tG(GCC)D1 71 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)D2tG(GCC)D2 71 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)EtG(GCC)E 71 nt5.57□□□□□ -1.52
SMD3P43321 SUF20tG(GCC)F1 71 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)F2tG(GCC)F2 71 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)G1tG(GCC)G1 71 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)G2tG(GCC)G2 71 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)J1tG(GCC)J1 71 nt5.57□□□□□ -1.52
SMD3P43321 SUF23tG(GCC)J2 71 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)MtG(GCC)M 71 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)O1tG(GCC)O1 71 nt5.57□□□□□ -1.52
SMD3P43321 SUF17tG(GCC)O2 71 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)P1tG(GCC)P1 71 nt5.57□□□□□ -1.52
SMD3P43321 tG(GCC)P2tG(GCC)P2 71 nt5.57□□□□□ -1.52
SMD3P43321 YSC83YHR017W 1158 nt5.57□□□□□ -1.52
SMD3P43321 PTC7YHR076W 1032 nt5.57□□□□□ -1.52
SMD3P43321 YPR204WYPR204W 3099 nt5.57□□□□□ -1.52
SMD3P43321 HEM1YDR232W 1647 nt5.56□□□□□ -1.52
SMD3P43321 ARG81YML099C 2643 nt5.56□□□□□ -1.52
SMD3P43321 SPG5YMR191W 1122 nt5.56□□□□□ -1.52
SMD3P43321 ERG10YPL028W 1197 nt5.56□□□□□ -1.52
SMD3P43321 PMT3YOR321W 2262 nt5.56□□□□□ -1.52
SMD3P43321 EFT2YDR385W 2529 nt5.56□□□□□ -1.52
SMD3P43321 EFT1YOR133W 2529 nt5.56□□□□□ -1.52
SMD3P43321 RAP1YNL216W 2484 nt5.56□□□□□ -1.52
SMD3P43321 RIO1YOR119C 1455 nt5.56□□□□□ -1.52
SMD3P43321 FRE5YOR384W 2085 nt5.55□□□□□ -1.52
SMD3P43321 REC107YJR021C 945 nt5.55□□□□□ -1.52
SMD3P43321 RPL31BYLR406C 342 nt5.55□□□□□ -1.52
SMD3P43321 GDH1YOR375C 1365 nt5.55□□□□□ -1.52
SMD3P43321 ACS1YAL054C 2142 nt5.54□□□□□ -1.52
SMD3P43321 snR82snR82 268 nt5.54□□□□□ -1.52
SMD3P43321 YGR127WYGR127W 939 nt5.54□□□□□ -1.52
SMD3P43321 ICS3YJL077C 396 nt5.54□□□□□ -1.52
SMD3P43321 NCA3YJL116C 1014 nt5.54□□□□□ -1.52
SMD3P43321 ATG36YJL185C 882 nt5.54□□□□□ -1.52
SMD3P43321 LAG2YOL025W 1983 nt5.54□□□□□ -1.52
SMD3P43321 PLB2YMR006C 2121 nt5.53□□□□□ -1.52
SMD3P43321 BRN1YBL097W 2265 nt5.53□□□□□ -1.52
SMD3P43321 YBR113WYBR113W 483 nt5.53□□□□□ -1.52
SMD3P43321 PPM2YOL141W 2088 nt5.52□□□□□ -1.53
SMD3P43321 MIP1YOR330C 3765 nt5.52□□□□□ -1.53
SMD3P43321 CBK1YNL161W 2271 nt5.52□□□□□ -1.53
SMD3P43321 FBA1YKL060C 1080 nt5.52□□□□□ -1.53
SMD3P43321 NTG2YOL043C 1143 nt5.52□□□□□ -1.53
SMD3P43321 YHR020WYHR020W 2067 nt5.52□□□□□ -1.53
SMD3P43321 EDE1YBL047C 4146 nt5.52□□□□□ -1.53
SMD3P43321 UTR2YEL040W 1404 nt5.51□□□□□ -1.53
SMD3P43321 CIS3YJL158C 684 nt5.51□□□□□ -1.53
SMD3P43321 ADE1YAR015W 921 nt5.51□□□□□ -1.53
SMD3P43321 GET4YOR164C 939 nt5.51□□□□□ -1.53
SMD3P43321 IMA5YJL216C 1746 nt5.51□□□□□ -1.53
SMD3P43321 HXK2YGL253W 1461 nt5.51□□□□□ -1.53
SMD3P43321 DAL7YIR031C 1665 nt5.5□□□□□ -1.53
SMD3P43321 DML1YMR211W 1428 nt5.5□□□□□ -1.53
SMD3P43321 BIM1YER016W 1035 nt5.5□□□□□ -1.53
SMD3P43321 THI4YGR144W 981 nt5.5□□□□□ -1.53
SMD3P43321 RPP1YHR062C 882 nt5.5□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 79.1 ms