Protein–RNA interactions for Protein: P10284

Hoxb4, Homeobox protein Hox-B4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb4P10284 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxb4P10284 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxb4P10284 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hoxb4P10284 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxb4P10284 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxb4P10284 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.67■□□□□ 0.9
Hoxb4P10284 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.67■□□□□ 0.9
Hoxb4P10284 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxb4P10284 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.66■□□□□ 0.9
Hoxb4P10284 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.66■□□□□ 0.9
Hoxb4P10284 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxb4P10284 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hoxb4P10284 Gm7417-201ENSMUST00000192950 473 ntBASIC20.66■□□□□ 0.9
Hoxb4P10284 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hoxb4P10284 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxb4P10284 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxb4P10284 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Hoxb4P10284 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.65■□□□□ 0.9
Hoxb4P10284 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxb4P10284 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxb4P10284 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hoxb4P10284 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.63■□□□□ 0.89
Hoxb4P10284 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxb4P10284 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxb4P10284 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxb4P10284 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxb4P10284 Gm27454-201ENSMUST00000185090 204 ntBASIC20.62■□□□□ 0.89
Hoxb4P10284 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.61■□□□□ 0.89
Hoxb4P10284 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxb4P10284 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxb4P10284 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxb4P10284 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.61■□□□□ 0.89
Hoxb4P10284 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxb4P10284 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxb4P10284 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxb4P10284 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxb4P10284 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxb4P10284 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.6■□□□□ 0.89
Hoxb4P10284 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxb4P10284 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxb4P10284 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxb4P10284 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxb4P10284 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxb4P10284 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxb4P10284 Gm45417-201ENSMUST00000209533 758 ntBASIC20.59■□□□□ 0.89
Hoxb4P10284 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Hoxb4P10284 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxb4P10284 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxb4P10284 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.58■□□□□ 0.89
Hoxb4P10284 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.57■□□□□ 0.88
Hoxb4P10284 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.57■□□□□ 0.88
Hoxb4P10284 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.57■□□□□ 0.88
Hoxb4P10284 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Hoxb4P10284 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxb4P10284 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hoxb4P10284 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxb4P10284 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Hoxb4P10284 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxb4P10284 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxb4P10284 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxb4P10284 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Hoxb4P10284 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.55■□□□□ 0.88
Hoxb4P10284 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxb4P10284 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxb4P10284 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxb4P10284 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Hoxb4P10284 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxb4P10284 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxb4P10284 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxb4P10284 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxb4P10284 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxb4P10284 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxb4P10284 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.53■□□□□ 0.88
Hoxb4P10284 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxb4P10284 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxb4P10284 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxb4P10284 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.52■□□□□ 0.88
Hoxb4P10284 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.52■□□□□ 0.88
Hoxb4P10284 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxb4P10284 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxb4P10284 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxb4P10284 Gm12922-201ENSMUST00000120626 809 ntBASIC20.51■□□□□ 0.87
Hoxb4P10284 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxb4P10284 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.51■□□□□ 0.87
Hoxb4P10284 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.51■□□□□ 0.87
Hoxb4P10284 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.51■□□□□ 0.87
Hoxb4P10284 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxb4P10284 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxb4P10284 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.5■□□□□ 0.87
Hoxb4P10284 Gm22238-201ENSMUST00000175222 88 ntBASIC20.5■□□□□ 0.87
Hoxb4P10284 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxb4P10284 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.5■□□□□ 0.87
Hoxb4P10284 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
Hoxb4P10284 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.5■□□□□ 0.87
Hoxb4P10284 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxb4P10284 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxb4P10284 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxb4P10284 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxb4P10284 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxb4P10284 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms