Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMPD2O60906 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMPD2O60906 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMPD2O60906 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.63■■□□□ 1.05
SMPD2O60906 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMPD2O60906 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMPD2O60906 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMPD2O60906 KRT18P60-201ENST00000312876 1297 ntBASIC21.62■■□□□ 1.05
SMPD2O60906 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMPD2O60906 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMPD2O60906 AC004987.1-201ENST00000428627 508 ntBASIC21.62■■□□□ 1.05
SMPD2O60906 ATP5G2P3-201ENST00000429083 425 ntBASIC21.62■■□□□ 1.05
SMPD2O60906 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMPD2O60906 AC092296.2-201ENST00000589470 999 ntBASIC21.62■■□□□ 1.05
SMPD2O60906 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMPD2O60906 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMPD2O60906 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SMPD2O60906 ECEL1P2-201ENST00000461596 1295 ntBASIC21.61■■□□□ 1.05
SMPD2O60906 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.61■■□□□ 1.05
SMPD2O60906 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.61■■□□□ 1.05
SMPD2O60906 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMPD2O60906 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMPD2O60906 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMPD2O60906 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMPD2O60906 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMPD2O60906 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMPD2O60906 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.59■■□□□ 1.05
SMPD2O60906 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMPD2O60906 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.59■■□□□ 1.05
SMPD2O60906 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMPD2O60906 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMPD2O60906 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMPD2O60906 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SMPD2O60906 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMPD2O60906 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMPD2O60906 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMPD2O60906 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMPD2O60906 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.58■■□□□ 1.05
SMPD2O60906 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.58■■□□□ 1.05
SMPD2O60906 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SMPD2O60906 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.58■■□□□ 1.05
SMPD2O60906 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMPD2O60906 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.57■■□□□ 1.04
SMPD2O60906 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMPD2O60906 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.57■■□□□ 1.04
SMPD2O60906 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMPD2O60906 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SMPD2O60906 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMPD2O60906 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.55■■□□□ 1.04
SMPD2O60906 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.55■■□□□ 1.04
SMPD2O60906 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMPD2O60906 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.55■■□□□ 1.04
SMPD2O60906 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SMPD2O60906 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMPD2O60906 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.55■■□□□ 1.04
SMPD2O60906 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.54■■□□□ 1.04
SMPD2O60906 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.54■■□□□ 1.04
SMPD2O60906 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMPD2O60906 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMPD2O60906 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMPD2O60906 RARRES2P1-201ENST00000474487 481 ntBASIC21.54■■□□□ 1.04
SMPD2O60906 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.54■■□□□ 1.04
SMPD2O60906 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMPD2O60906 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
SMPD2O60906 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMPD2O60906 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.53■■□□□ 1.04
SMPD2O60906 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SMPD2O60906 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMPD2O60906 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMPD2O60906 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.52■■□□□ 1.04
SMPD2O60906 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMPD2O60906 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SMPD2O60906 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMPD2O60906 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.51■■□□□ 1.03
SMPD2O60906 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMPD2O60906 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMPD2O60906 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.51■■□□□ 1.03
SMPD2O60906 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMPD2O60906 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMPD2O60906 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMPD2O60906 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMPD2O60906 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMPD2O60906 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.5■■□□□ 1.03
SMPD2O60906 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.5■■□□□ 1.03
SMPD2O60906 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.5■■□□□ 1.03
SMPD2O60906 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SMPD2O60906 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMPD2O60906 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SMPD2O60906 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SMPD2O60906 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMPD2O60906 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SMPD2O60906 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SMPD2O60906 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.49■■□□□ 1.03
SMPD2O60906 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMPD2O60906 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMPD2O60906 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SMPD2O60906 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMPD2O60906 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SMPD2O60906 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMPD2O60906 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms