Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM238LA0A1B0GVL6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM238LA0A1B0GVL6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM238LA0A1B0GVL6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM238LA0A1B0GVL6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM238LA0A1B0GVL6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM238LA0A1B0GVL6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM238LA0A1B0GVL6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM238LA0A1B0GVL6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM238LA0A1B0GVL6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TMEM238LA0A1B0GVL6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TMEM238LA0A1B0GVL6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM238LA0A1B0GVL6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM238LA0A1B0GVL6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM238LA0A1B0GVL6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM238LA0A1B0GVL6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM238LA0A1B0GVL6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM238LA0A1B0GVL6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM238LA0A1B0GVL6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM238LA0A1B0GVL6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMEM238LA0A1B0GVL6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM238LA0A1B0GVL6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM238LA0A1B0GVL6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM238LA0A1B0GVL6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM238LA0A1B0GVL6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM238LA0A1B0GVL6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM238LA0A1B0GVL6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM238LA0A1B0GVL6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM238LA0A1B0GVL6 AC012676.1-201ENST00000574705 1949 ntBASIC17.25■□□□□ 0.35
TMEM238LA0A1B0GVL6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM238LA0A1B0GVL6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM238LA0A1B0GVL6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM238LA0A1B0GVL6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM238LA0A1B0GVL6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TMEM238LA0A1B0GVL6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
TMEM238LA0A1B0GVL6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM238LA0A1B0GVL6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM238LA0A1B0GVL6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM238LA0A1B0GVL6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM238LA0A1B0GVL6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM238LA0A1B0GVL6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM238LA0A1B0GVL6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM238LA0A1B0GVL6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM238LA0A1B0GVL6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM238LA0A1B0GVL6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM238LA0A1B0GVL6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM238LA0A1B0GVL6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TMEM238LA0A1B0GVL6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM238LA0A1B0GVL6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM238LA0A1B0GVL6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM238LA0A1B0GVL6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TMEM238LA0A1B0GVL6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM238LA0A1B0GVL6 AL024507.2-201ENST00000606070 2574 ntBASIC17.22■□□□□ 0.35
TMEM238LA0A1B0GVL6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM238LA0A1B0GVL6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM238LA0A1B0GVL6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM238LA0A1B0GVL6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM238LA0A1B0GVL6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM238LA0A1B0GVL6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM238LA0A1B0GVL6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM238LA0A1B0GVL6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM238LA0A1B0GVL6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM238LA0A1B0GVL6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM238LA0A1B0GVL6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM238LA0A1B0GVL6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM238LA0A1B0GVL6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM238LA0A1B0GVL6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM238LA0A1B0GVL6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM238LA0A1B0GVL6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM238LA0A1B0GVL6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM238LA0A1B0GVL6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TMEM238LA0A1B0GVL6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TMEM238LA0A1B0GVL6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM238LA0A1B0GVL6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM238LA0A1B0GVL6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM238LA0A1B0GVL6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM238LA0A1B0GVL6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM238LA0A1B0GVL6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM238LA0A1B0GVL6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM238LA0A1B0GVL6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM238LA0A1B0GVL6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM238LA0A1B0GVL6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM238LA0A1B0GVL6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM238LA0A1B0GVL6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM238LA0A1B0GVL6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM238LA0A1B0GVL6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM238LA0A1B0GVL6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM238LA0A1B0GVL6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.16■□□□□ 0.34
TMEM238LA0A1B0GVL6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM238LA0A1B0GVL6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM238LA0A1B0GVL6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM238LA0A1B0GVL6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM238LA0A1B0GVL6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM238LA0A1B0GVL6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM238LA0A1B0GVL6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM238LA0A1B0GVL6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms