Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF103-CHMP3A0A140T963 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.58■■□□□ 1.37
RNF103-CHMP3A0A140T963 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF103-CHMP3A0A140T963 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
RNF103-CHMP3A0A140T963 AC145676.1-201ENST00000514988 2004 ntBASIC23.57■■□□□ 1.36
RNF103-CHMP3A0A140T963 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF103-CHMP3A0A140T963 DUX4L29-201ENST00000425409 679 ntBASIC23.57■■□□□ 1.36
RNF103-CHMP3A0A140T963 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF103-CHMP3A0A140T963 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF103-CHMP3A0A140T963 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF103-CHMP3A0A140T963 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF103-CHMP3A0A140T963 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF103-CHMP3A0A140T963 AC110285.7-201ENST00000624417 1536 ntBASIC23.56■■□□□ 1.36
RNF103-CHMP3A0A140T963 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF103-CHMP3A0A140T963 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF103-CHMP3A0A140T963 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF103-CHMP3A0A140T963 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF103-CHMP3A0A140T963 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF103-CHMP3A0A140T963 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF103-CHMP3A0A140T963 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RNF103-CHMP3A0A140T963 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
RNF103-CHMP3A0A140T963 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF103-CHMP3A0A140T963 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF103-CHMP3A0A140T963 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF103-CHMP3A0A140T963 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF103-CHMP3A0A140T963 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF103-CHMP3A0A140T963 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF103-CHMP3A0A140T963 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF103-CHMP3A0A140T963 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF103-CHMP3A0A140T963 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF103-CHMP3A0A140T963 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF103-CHMP3A0A140T963 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF103-CHMP3A0A140T963 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF103-CHMP3A0A140T963 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF103-CHMP3A0A140T963 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF103-CHMP3A0A140T963 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF103-CHMP3A0A140T963 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF103-CHMP3A0A140T963 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RNF103-CHMP3A0A140T963 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
RNF103-CHMP3A0A140T963 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF103-CHMP3A0A140T963 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.51■■□□□ 1.35
RNF103-CHMP3A0A140T963 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RNF103-CHMP3A0A140T963 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF103-CHMP3A0A140T963 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.5■■□□□ 1.35
RNF103-CHMP3A0A140T963 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.5■■□□□ 1.35
RNF103-CHMP3A0A140T963 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF103-CHMP3A0A140T963 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF103-CHMP3A0A140T963 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RNF103-CHMP3A0A140T963 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
RNF103-CHMP3A0A140T963 RPS2P35-201ENST00000443417 897 ntBASIC23.49■■□□□ 1.35
RNF103-CHMP3A0A140T963 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.49■■□□□ 1.35
RNF103-CHMP3A0A140T963 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RNF103-CHMP3A0A140T963 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF103-CHMP3A0A140T963 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF103-CHMP3A0A140T963 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF103-CHMP3A0A140T963 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF103-CHMP3A0A140T963 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.48■■□□□ 1.35
RNF103-CHMP3A0A140T963 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF103-CHMP3A0A140T963 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.48■■□□□ 1.35
RNF103-CHMP3A0A140T963 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.47■■□□□ 1.35
RNF103-CHMP3A0A140T963 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF103-CHMP3A0A140T963 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.47■■□□□ 1.35
RNF103-CHMP3A0A140T963 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RNF103-CHMP3A0A140T963 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RNF103-CHMP3A0A140T963 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RNF103-CHMP3A0A140T963 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.46■■□□□ 1.35
RNF103-CHMP3A0A140T963 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF103-CHMP3A0A140T963 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
RNF103-CHMP3A0A140T963 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF103-CHMP3A0A140T963 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.46■■□□□ 1.35
RNF103-CHMP3A0A140T963 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.46■■□□□ 1.35
RNF103-CHMP3A0A140T963 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF103-CHMP3A0A140T963 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
RNF103-CHMP3A0A140T963 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.45■■□□□ 1.35
RNF103-CHMP3A0A140T963 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF103-CHMP3A0A140T963 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF103-CHMP3A0A140T963 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF103-CHMP3A0A140T963 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF103-CHMP3A0A140T963 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RNF103-CHMP3A0A140T963 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF103-CHMP3A0A140T963 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.44■■□□□ 1.34
RNF103-CHMP3A0A140T963 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF103-CHMP3A0A140T963 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
RNF103-CHMP3A0A140T963 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF103-CHMP3A0A140T963 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.43■■□□□ 1.34
RNF103-CHMP3A0A140T963 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF103-CHMP3A0A140T963 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF103-CHMP3A0A140T963 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
RNF103-CHMP3A0A140T963 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
RNF103-CHMP3A0A140T963 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.42■■□□□ 1.34
RNF103-CHMP3A0A140T963 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
RNF103-CHMP3A0A140T963 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF103-CHMP3A0A140T963 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.41■■□□□ 1.34
RNF103-CHMP3A0A140T963 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
RNF103-CHMP3A0A140T963 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.41■■□□□ 1.34
RNF103-CHMP3A0A140T963 AC093323.1-202ENST00000635031 2045 ntBASIC23.41■■□□□ 1.34
RNF103-CHMP3A0A140T963 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
RNF103-CHMP3A0A140T963 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF103-CHMP3A0A140T963 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF103-CHMP3A0A140T963 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms