Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 RAP2CP1-202ENST00000605179 643 ntBASIC22.64■■□□□ 1.21
TRAV17A0A0B4J275 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.63■■□□□ 1.21
TRAV17A0A0B4J275 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV17A0A0B4J275 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV17A0A0B4J275 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV17A0A0B4J275 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV17A0A0B4J275 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.62■■□□□ 1.21
TRAV17A0A0B4J275 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TRAV17A0A0B4J275 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV17A0A0B4J275 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
TRAV17A0A0B4J275 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV17A0A0B4J275 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV17A0A0B4J275 DUX4L9-201ENST00000449051 1259 ntBASIC22.61■■□□□ 1.21
TRAV17A0A0B4J275 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TRAV17A0A0B4J275 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.6■■□□□ 1.21
TRAV17A0A0B4J275 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRAV17A0A0B4J275 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRAV17A0A0B4J275 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.6■■□□□ 1.21
TRAV17A0A0B4J275 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.6■■□□□ 1.21
TRAV17A0A0B4J275 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRAV17A0A0B4J275 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRAV17A0A0B4J275 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRAV17A0A0B4J275 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.59■■□□□ 1.21
TRAV17A0A0B4J275 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
TRAV17A0A0B4J275 ABCB10P1-201ENST00000614297 2181 ntBASIC22.58■■□□□ 1.21
TRAV17A0A0B4J275 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
TRAV17A0A0B4J275 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRAV17A0A0B4J275 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.58■■□□□ 1.21
TRAV17A0A0B4J275 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAV17A0A0B4J275 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRAV17A0A0B4J275 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV17A0A0B4J275 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.57■■□□□ 1.2
TRAV17A0A0B4J275 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV17A0A0B4J275 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.56■■□□□ 1.2
TRAV17A0A0B4J275 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV17A0A0B4J275 BHLHE23-202ENST00000612929 1109 ntBASIC22.56■■□□□ 1.2
TRAV17A0A0B4J275 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV17A0A0B4J275 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV17A0A0B4J275 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TRAV17A0A0B4J275 AC074183.2-201ENST00000623112 922 ntBASIC22.55■■□□□ 1.2
TRAV17A0A0B4J275 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV17A0A0B4J275 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.55■■□□□ 1.2
TRAV17A0A0B4J275 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV17A0A0B4J275 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV17A0A0B4J275 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV17A0A0B4J275 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV17A0A0B4J275 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.54■■□□□ 1.2
TRAV17A0A0B4J275 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV17A0A0B4J275 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.54■■□□□ 1.2
TRAV17A0A0B4J275 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.54■■□□□ 1.2
TRAV17A0A0B4J275 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.54■■□□□ 1.2
TRAV17A0A0B4J275 MIR6765-201ENST00000614092 87 ntBASIC22.54■■□□□ 1.2
TRAV17A0A0B4J275 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TRAV17A0A0B4J275 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TRAV17A0A0B4J275 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV17A0A0B4J275 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV17A0A0B4J275 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV17A0A0B4J275 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV17A0A0B4J275 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV17A0A0B4J275 AC018755.3-202ENST00000596210 929 ntBASIC22.53■■□□□ 1.2
TRAV17A0A0B4J275 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.53■■□□□ 1.2
TRAV17A0A0B4J275 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
TRAV17A0A0B4J275 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TRAV17A0A0B4J275 SPCS2P3-201ENST00000500401 656 ntBASIC22.52■■□□□ 1.2
TRAV17A0A0B4J275 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAV17A0A0B4J275 AL359504.2-201ENST00000605506 1601 ntBASIC22.52■■□□□ 1.2
TRAV17A0A0B4J275 WHAMMP3-201ENST00000611636 1609 ntBASIC22.52■■□□□ 1.2
TRAV17A0A0B4J275 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAV17A0A0B4J275 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TRAV17A0A0B4J275 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
TRAV17A0A0B4J275 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.51■■□□□ 1.19
TRAV17A0A0B4J275 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAV17A0A0B4J275 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.51■■□□□ 1.19
TRAV17A0A0B4J275 AC139795.1-202ENST00000500444 432 ntBASIC22.51■■□□□ 1.19
TRAV17A0A0B4J275 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.51■■□□□ 1.19
TRAV17A0A0B4J275 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAV17A0A0B4J275 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.5■■□□□ 1.19
TRAV17A0A0B4J275 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAV17A0A0B4J275 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAV17A0A0B4J275 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAV17A0A0B4J275 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAV17A0A0B4J275 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRAV17A0A0B4J275 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.49■■□□□ 1.19
TRAV17A0A0B4J275 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.49■■□□□ 1.19
TRAV17A0A0B4J275 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.49■■□□□ 1.19
TRAV17A0A0B4J275 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAV17A0A0B4J275 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAV17A0A0B4J275 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.48■■□□□ 1.19
TRAV17A0A0B4J275 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.48■■□□□ 1.19
TRAV17A0A0B4J275 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRAV17A0A0B4J275 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRAV17A0A0B4J275 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAV17A0A0B4J275 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.47■■□□□ 1.19
TRAV17A0A0B4J275 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.47■■□□□ 1.19
TRAV17A0A0B4J275 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
TRAV17A0A0B4J275 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.47■■□□□ 1.19
TRAV17A0A0B4J275 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.47■■□□□ 1.19
TRAV17A0A0B4J275 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.47■■□□□ 1.19
TRAV17A0A0B4J275 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
TRAV17A0A0B4J275 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms