Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
HDAC5Q9UQL6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 BICD1-207ENST00000551848 1962 ntBASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 Z69720.1-201ENST00000601483 472 ntBASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HDAC5Q9UQL6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 TPSP2-201ENST00000561760 610 ntBASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 MIR3180-1-201ENST00000580374 94 ntBASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 MIR3180-3-201ENST00000584616 94 ntBASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 FLJ13224-201ENST00000313737 1514 ntBASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 AC090340.1-201ENST00000620778 4980 ntBASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 ABALON-201ENST00000629058 1903 ntBASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HDAC5Q9UQL6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 AC112698.1-201ENST00000510299 916 ntBASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.54■■□□□ 1.2
HDAC5Q9UQL6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms