Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 AP000692.2-201ENST00000608391 879 ntBASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGB4Q9UN71 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 PP12613-201ENST00000424958 2230 ntBASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 FAM197Y1-201ENST00000421178 764 ntBASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 AL109659.2-201ENST00000606809 1674 ntBASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB4Q9UN71 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 CD177P1-201ENST00000606252 935 ntBASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 ITM2C-210ENST00000620962 501 ntBASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGB4Q9UN71 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PCDHGB4Q9UN71 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PCDHGB4Q9UN71 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB4Q9UN71 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB4Q9UN71 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB4Q9UN71 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB4Q9UN71 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGB4Q9UN71 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 TSPY20P-201ENST00000450910 630 ntBASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 AP001412.1-201ENST00000608405 714 ntBASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGB4Q9UN71 MYLKP1-201ENST00000509077 1580 ntBASIC17.57■□□□□ 0.4
PCDHGB4Q9UN71 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGB4Q9UN71 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms