Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HACD3Q9P035 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
HACD3Q9P035 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.34■□□□□ 0.53
HACD3Q9P035 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
HACD3Q9P035 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.34■□□□□ 0.53
HACD3Q9P035 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.34■□□□□ 0.53
HACD3Q9P035 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.34■□□□□ 0.53
HACD3Q9P035 FAM8A6P-201ENST00000407496 1135 ntBASIC18.34■□□□□ 0.53
HACD3Q9P035 SPDYE15P-201ENST00000424157 909 ntBASIC18.34■□□□□ 0.53
HACD3Q9P035 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.34■□□□□ 0.53
HACD3Q9P035 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.34■□□□□ 0.53
HACD3Q9P035 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.34■□□□□ 0.53
HACD3Q9P035 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.34■□□□□ 0.53
HACD3Q9P035 AL136038.4-201ENST00000603606 1261 ntBASIC18.34■□□□□ 0.53
HACD3Q9P035 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 AC093677.2-201ENST00000600169 1863 ntBASIC18.34■□□□□ 0.53
HACD3Q9P035 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.34■□□□□ 0.53
HACD3Q9P035 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HACD3Q9P035 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HACD3Q9P035 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
HACD3Q9P035 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.33■□□□□ 0.53
HACD3Q9P035 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HACD3Q9P035 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HACD3Q9P035 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HACD3Q9P035 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HACD3Q9P035 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.33■□□□□ 0.52
HACD3Q9P035 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.33■□□□□ 0.52
HACD3Q9P035 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.33■□□□□ 0.52
HACD3Q9P035 DUX4L26-201ENST00000489078 1255 ntBASIC18.33■□□□□ 0.52
HACD3Q9P035 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HACD3Q9P035 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.33■□□□□ 0.52
HACD3Q9P035 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HACD3Q9P035 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HACD3Q9P035 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
HACD3Q9P035 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HACD3Q9P035 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HACD3Q9P035 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HACD3Q9P035 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HACD3Q9P035 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HACD3Q9P035 PCDHB18P-201ENST00000524813 2368 ntBASIC18.33■□□□□ 0.52
HACD3Q9P035 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.33■□□□□ 0.52
HACD3Q9P035 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HACD3Q9P035 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
HACD3Q9P035 ABALON-201ENST00000629058 1903 ntBASIC18.33■□□□□ 0.52
HACD3Q9P035 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.33■□□□□ 0.52
HACD3Q9P035 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HACD3Q9P035 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.32■□□□□ 0.52
HACD3Q9P035 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HACD3Q9P035 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HACD3Q9P035 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.32■□□□□ 0.52
HACD3Q9P035 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HACD3Q9P035 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HACD3Q9P035 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HACD3Q9P035 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.32■□□□□ 0.52
HACD3Q9P035 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HACD3Q9P035 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HACD3Q9P035 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HACD3Q9P035 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HACD3Q9P035 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HACD3Q9P035 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.32■□□□□ 0.52
HACD3Q9P035 FAM210CP-201ENST00000445714 574 ntBASIC18.32■□□□□ 0.52
HACD3Q9P035 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HACD3Q9P035 KRT18P21-201ENST00000515767 1272 ntBASIC18.32■□□□□ 0.52
HACD3Q9P035 AC022616.7-201ENST00000525383 220 ntBASIC18.32■□□□□ 0.52
HACD3Q9P035 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HACD3Q9P035 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.32■□□□□ 0.52
HACD3Q9P035 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HACD3Q9P035 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.32■□□□□ 0.52
HACD3Q9P035 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.32■□□□□ 0.52
HACD3Q9P035 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.32■□□□□ 0.52
HACD3Q9P035 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.32■□□□□ 0.52
HACD3Q9P035 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.32■□□□□ 0.52
HACD3Q9P035 AL391807.1-203ENST00000604392 2365 ntBASIC18.32■□□□□ 0.52
HACD3Q9P035 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HACD3Q9P035 KRT89P-201ENST00000620027 1478 ntBASIC18.32■□□□□ 0.52
HACD3Q9P035 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HACD3Q9P035 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HACD3Q9P035 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.32■□□□□ 0.52
HACD3Q9P035 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HACD3Q9P035 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 AC135776.1-201ENST00000319817 2481 ntBASIC18.31■□□□□ 0.52
HACD3Q9P035 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HACD3Q9P035 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HACD3Q9P035 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms