Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S4Q9NUP1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
BLOC1S4Q9NUP1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
BLOC1S4Q9NUP1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 AL136038.3-201ENST00000561909 1096 ntBASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 GPR32P1-201ENST00000601788 811 ntBASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S4Q9NUP1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 AL353692.3-201ENST00000407031 1396 ntBASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 KRT18P65-201ENST00000439811 1286 ntBASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S4Q9NUP1 AC006116.8-202ENST00000587620 1550 ntBASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 AL645929.1-201ENST00000420084 975 ntBASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 Z83836.1-201ENST00000624605 1642 ntBASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
BLOC1S4Q9NUP1 AC005332.8-201ENST00000622750 2735 ntBASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 AC134043.2-201ENST00000624206 2238 ntBASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 FAM86EP-206ENST00000510506 987 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms