Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 SLC25A3P1-201ENST00000443844 931 ntBASIC16.85■□□□□ 0.29
POLE3Q9NRF9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 AC034232.1-201ENST00000506026 1064 ntBASIC16.85■□□□□ 0.29
POLE3Q9NRF9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 AL031432.5-201ENST00000641059 760 ntBASIC16.85■□□□□ 0.29
POLE3Q9NRF9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 AC008764.6-201ENST00000595909 2069 ntBASIC16.85■□□□□ 0.29
POLE3Q9NRF9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLE3Q9NRF9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.84■□□□□ 0.29
POLE3Q9NRF9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 AC007613.1-201ENST00000572811 2597 ntBASIC16.84■□□□□ 0.29
POLE3Q9NRF9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
POLE3Q9NRF9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLE3Q9NRF9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLE3Q9NRF9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLE3Q9NRF9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLE3Q9NRF9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLE3Q9NRF9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLE3Q9NRF9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms