Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSU72Q9NP77 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SSU72Q9NP77 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSU72Q9NP77 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSU72Q9NP77 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSU72Q9NP77 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSU72Q9NP77 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.99■□□□□ 0.47
SSU72Q9NP77 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSU72Q9NP77 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSU72Q9NP77 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSU72Q9NP77 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.98■□□□□ 0.47
SSU72Q9NP77 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSU72Q9NP77 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSU72Q9NP77 AC100803.2-201ENST00000562459 1963 ntBASIC17.97■□□□□ 0.47
SSU72Q9NP77 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSU72Q9NP77 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 AC132938.6-201ENST00000623828 1655 ntBASIC17.97■□□□□ 0.47
SSU72Q9NP77 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSU72Q9NP77 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSU72Q9NP77 KRT18P23-201ENST00000435622 1283 ntBASIC17.97■□□□□ 0.47
SSU72Q9NP77 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 AF186192.3-201ENST00000583427 947 ntBASIC17.97■□□□□ 0.47
SSU72Q9NP77 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 DGCR10-201ENST00000609839 495 ntBASIC17.97■□□□□ 0.47
SSU72Q9NP77 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSU72Q9NP77 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSU72Q9NP77 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSU72Q9NP77 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSU72Q9NP77 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSU72Q9NP77 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SSU72Q9NP77 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSU72Q9NP77 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.96■□□□□ 0.47
SSU72Q9NP77 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.96■□□□□ 0.47
SSU72Q9NP77 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SSU72Q9NP77 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SSU72Q9NP77 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.96■□□□□ 0.47
SSU72Q9NP77 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SSU72Q9NP77 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SSU72Q9NP77 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SSU72Q9NP77 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SSU72Q9NP77 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SSU72Q9NP77 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SSU72Q9NP77 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms