Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 AP003041.3-201ENST00000527151 707 ntBASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 AP003071.4-201ENST00000562276 1284 ntBASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR2J3Q9H1A7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 MIR718-201ENST00000390190 70 ntBASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 BX088651.1-201ENST00000540551 451 ntBASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
POLR2J3Q9H1A7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR2J3Q9H1A7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR2J3Q9H1A7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR2J3Q9H1A7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.77■□□□□ 0.27
POLR2J3Q9H1A7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR2J3Q9H1A7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR2J3Q9H1A7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR2J3Q9H1A7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
POLR2J3Q9H1A7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.77■□□□□ 0.27
POLR2J3Q9H1A7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 AC012313.1-201ENST00000593393 3059 ntBASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 AC104390.1-201ENST00000555663 520 ntBASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 MIR4785-201ENST00000585005 73 ntBASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 CR769767.2-201ENST00000622735 460 ntBASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 PRORSD1P-202ENST00000563365 2154 ntBASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 AC093010.1-201ENST00000473625 1624 ntBASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 AC092338.2-201ENST00000568827 1415 ntBASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 AC012317.2-201ENST00000623305 2251 ntBASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
POLR2J3Q9H1A7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms