Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PHACTR1Q9C0D0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 RPS2P55-201ENST00000397318 883 ntBASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 AC107956.1-201ENST00000494359 873 ntBASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 AC233702.5-201ENST00000584107 538 ntBASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 AC113410.3-201ENST00000623366 203 ntBASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 AC092338.2-201ENST00000568827 1415 ntBASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 AC132938.6-201ENST00000623828 1655 ntBASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 AL356309.3-201ENST00000624132 1934 ntBASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHACTR1Q9C0D0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 AL355312.1-201ENST00000407115 2176 ntBASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 AC022898.2-201ENST00000616822 1312 ntBASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PHACTR1Q9C0D0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms