Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPS4Q9BT78 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.66■□□□□ 0.26
COPS4Q9BT78 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS4Q9BT78 AP001094.4-201ENST00000579008 2176 ntBASIC16.65■□□□□ 0.26
COPS4Q9BT78 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS4Q9BT78 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPS4Q9BT78 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 KRT8P3-201ENST00000519669 1449 ntBASIC16.65■□□□□ 0.26
COPS4Q9BT78 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS4Q9BT78 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS4Q9BT78 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 AC128676.1-201ENST00000454392 318 ntBASIC16.65■□□□□ 0.26
COPS4Q9BT78 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 AP002982.1-201ENST00000492365 877 ntBASIC16.65■□□□□ 0.26
COPS4Q9BT78 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPS4Q9BT78 C1QBPP2-201ENST00000528754 825 ntBASIC16.65■□□□□ 0.26
COPS4Q9BT78 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPS4Q9BT78 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS4Q9BT78 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPS4Q9BT78 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.65■□□□□ 0.26
COPS4Q9BT78 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS4Q9BT78 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPS4Q9BT78 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.64■□□□□ 0.26
COPS4Q9BT78 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
COPS4Q9BT78 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.64■□□□□ 0.26
COPS4Q9BT78 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
COPS4Q9BT78 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COPS4Q9BT78 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.64■□□□□ 0.25
COPS4Q9BT78 POU5F1P3-201ENST00000428824 1078 ntBASIC16.64■□□□□ 0.25
COPS4Q9BT78 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.64■□□□□ 0.25
COPS4Q9BT78 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.64■□□□□ 0.25
COPS4Q9BT78 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.64■□□□□ 0.25
COPS4Q9BT78 AL445675.2-201ENST00000620291 557 ntBASIC16.64■□□□□ 0.25
COPS4Q9BT78 AC131212.4-201ENST00000623606 975 ntBASIC16.64■□□□□ 0.25
COPS4Q9BT78 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
COPS4Q9BT78 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
COPS4Q9BT78 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 OR6D1P-203ENST00000641209 4860 ntBASIC16.64■□□□□ 0.25
COPS4Q9BT78 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPS4Q9BT78 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms