Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 FST-202ENST00000396947 2538 ntTSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 ENSA-205ENST00000361532 792 ntTSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 RPS2P55-201ENST00000397318 883 ntBASIC10.82□□□□□ -0.68
LIMD2Q9BT23 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 SAPCD2P4-201ENST00000424595 1171 ntBASIC10.82□□□□□ -0.68
LIMD2Q9BT23 GCSHP5-201ENST00000443090 522 ntBASIC10.82□□□□□ -0.68
LIMD2Q9BT23 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 CA15P1-201ENST00000481698 905 ntBASIC10.82□□□□□ -0.68
LIMD2Q9BT23 AC107956.1-201ENST00000494359 873 ntBASIC10.82□□□□□ -0.68
LIMD2Q9BT23 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 TK2-204ENST00000525974 1178 ntTSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 SLC25A1P4-201ENST00000567977 778 ntBASIC10.82□□□□□ -0.68
LIMD2Q9BT23 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 MIR4785-201ENST00000585005 73 ntBASIC10.82□□□□□ -0.68
LIMD2Q9BT23 AC130371.2-201ENST00000619443 611 ntBASIC10.82□□□□□ -0.68
LIMD2Q9BT23 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AC126755.1-201ENST00000525846 6405 ntBASIC10.81□□□□□ -0.68
LIMD2Q9BT23 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AC096733.2-201ENST00000609937 1394 ntBASIC10.81□□□□□ -0.68
LIMD2Q9BT23 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 PRORSD1P-201ENST00000295112 541 ntBASIC10.81□□□□□ -0.68
LIMD2Q9BT23 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 ABHD17AP1-201ENST00000358206 933 ntBASIC10.81□□□□□ -0.68
LIMD2Q9BT23 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 MFAP1P1-201ENST00000442257 1255 ntBASIC10.81□□□□□ -0.68
LIMD2Q9BT23 MCCD1P1-208ENST00000445732 328 ntBASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AC233702.5-201ENST00000584107 538 ntBASIC10.81□□□□□ -0.68
LIMD2Q9BT23 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AL049637.2-201ENST00000641778 930 ntBASIC10.81□□□□□ -0.68
LIMD2Q9BT23 BOC-212ENST00000485230 2173 ntTSL 2 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms