Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA3Q99618 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA3Q99618 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA3Q99618 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA3Q99618 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA3Q99618 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDCA3Q99618 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CDCA3Q99618 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.77■□□□□ 0.6
CDCA3Q99618 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA3Q99618 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA3Q99618 CRYGEP-201ENST00000412192 528 ntBASIC18.77■□□□□ 0.6
CDCA3Q99618 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.77■□□□□ 0.6
CDCA3Q99618 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.77■□□□□ 0.6
CDCA3Q99618 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.77■□□□□ 0.6
CDCA3Q99618 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.77■□□□□ 0.6
CDCA3Q99618 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
CDCA3Q99618 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
CDCA3Q99618 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDCA3Q99618 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CDCA3Q99618 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.77■□□□□ 0.6
CDCA3Q99618 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.77■□□□□ 0.6
CDCA3Q99618 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.77■□□□□ 0.6
CDCA3Q99618 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CDCA3Q99618 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA3Q99618 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCA3Q99618 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
CDCA3Q99618 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.77■□□□□ 0.59
CDCA3Q99618 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDCA3Q99618 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDCA3Q99618 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.76■□□□□ 0.59
CDCA3Q99618 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDCA3Q99618 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDCA3Q99618 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.76■□□□□ 0.59
CDCA3Q99618 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.76■□□□□ 0.59
CDCA3Q99618 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDCA3Q99618 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 KRT18P2-201ENST00000447938 1258 ntBASIC18.76■□□□□ 0.59
CDCA3Q99618 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.76■□□□□ 0.59
CDCA3Q99618 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.76■□□□□ 0.59
CDCA3Q99618 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.76■□□□□ 0.59
CDCA3Q99618 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.76■□□□□ 0.59
CDCA3Q99618 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.76■□□□□ 0.59
CDCA3Q99618 MIR3197-201ENST00000582241 73 ntBASIC18.76■□□□□ 0.59
CDCA3Q99618 MIR4469-201ENST00000583919 79 ntBASIC18.76■□□□□ 0.59
CDCA3Q99618 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.76■□□□□ 0.59
CDCA3Q99618 C20orf181-201ENST00000623918 480 ntBASIC18.76■□□□□ 0.59
CDCA3Q99618 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.76■□□□□ 0.59
CDCA3Q99618 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDCA3Q99618 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCA3Q99618 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDCA3Q99618 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDCA3Q99618 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.75■□□□□ 0.59
CDCA3Q99618 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDCA3Q99618 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDCA3Q99618 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.75■□□□□ 0.59
CDCA3Q99618 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDCA3Q99618 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.75■□□□□ 0.59
CDCA3Q99618 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDCA3Q99618 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDCA3Q99618 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.75■□□□□ 0.59
CDCA3Q99618 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDCA3Q99618 CYMP-203ENST00000474680 1263 ntBASIC18.75■□□□□ 0.59
CDCA3Q99618 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDCA3Q99618 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.75■□□□□ 0.59
CDCA3Q99618 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDCA3Q99618 RFPL4AP1-201ENST00000530883 850 ntBASIC18.75■□□□□ 0.59
CDCA3Q99618 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.75■□□□□ 0.59
CDCA3Q99618 AC004706.3-202ENST00000621574 984 ntBASIC18.75■□□□□ 0.59
CDCA3Q99618 KRT8P47-201ENST00000604727 1398 ntBASIC18.75■□□□□ 0.59
CDCA3Q99618 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.75■□□□□ 0.59
CDCA3Q99618 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.75■□□□□ 0.59
CDCA3Q99618 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDCA3Q99618 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.75■□□□□ 0.59
CDCA3Q99618 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDCA3Q99618 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.75■□□□□ 0.59
CDCA3Q99618 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDCA3Q99618 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.74■□□□□ 0.59
CDCA3Q99618 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDCA3Q99618 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDCA3Q99618 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CDCA3Q99618 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.74■□□□□ 0.59
CDCA3Q99618 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.74■□□□□ 0.59
CDCA3Q99618 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CDCA3Q99618 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms